CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLTH0C02640g
(
Kluyveromyces thermotolerans
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
KLTH0C02640g
T052119_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBF1
M00374_2.00
Saccharomyces cerevisiae
NCACGTGAY
RTCACGTGN
PBM
Berger et al.(2006)
Cbf1
0.866
0.857
CBF1
M01520_2.00
Saccharomyces cerevisiae
CACGTGAYH
DRTCACGTG
PBM
Zhu et al.(2009)
Cbf1
0.866
0.857
CBF1
M07440_2.00
Saccharomyces cerevisiae
TCACGTGH
DCACGTGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1
0.866
0.857
CBF1
M08485_2.00
Saccharomyces cerevisiae
NCAYRTGN
NCAYRTGN
Misc
DeBoer et al.(2011)
YJR060W_1347
0.866
0.857
CBF1
M09483_2.00
Saccharomyces cerevisiae
KCACGTGAYN
NRTCACGTGM
Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506
0.866
0.857
CBF1
M09897_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_02
0.866
0.857
CBF1
M09898_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_03
0.866
0.857
CBF1
M09899_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_04
0.866
0.857
CBF1
M09900_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_B
0.866
0.857
CBF1
M09901_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_Q6
0.866
0.857
CBF1
M00010_2.00
Saccharomyces cerevisiae
NDCACGTGANN
NNTCACGTGHN
PBM
Badis et al.(2008)
CBF1_2160
0.855
0.837
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLTH0C02640g
bHLH
143
191
RKDSHKEVERRRRENINTAINKLSELLPVKESSKASILLRAAEYILKLK
Links
Other
bHLH
family TFs
Other
Kluyveromyces thermotolerans
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB03556.1
Alternaria brassicicola
AB03556.1
N
COCCADRAFT_99148
Bipolaris zeicola
COCCADRAFT_99148
N
COCMIDRAFT_92067
Bipolaris oryzae
COCMIDRAFT_92067
N
COCSADRAFT_164531
Bipolaris sorokiniana
COCSADRAFT_164531
N
COCVIDRAFT_94842
Bipolaris victoriae
COCVIDRAFT_94842
N
estExt_fgenesh1_kg.C_170011
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_170011
N
MPH_04568
Macrophomina phaseolina
MPH_04568
N
PTRG_04509
Pyrenophora triticirepentis
PTRG_04509
N
PTT_09206
Pyrenophora teres
PTT_09206
N
SETTUDRAFT_132813
Setosphaeria turcica
SETTUDRAFT_132813
N
UCRNP2_1116
Neofusicoccum parvum
UCRNP2_1116
N
W97_06465
Coniosporium apollinis
W97_06465
N