PDK_20s1630671g001 (Phoenix dactylifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 PDK_20s1630671g001 T052270_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.899 0.804
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH

DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.864 0.804
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN

NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.864 0.804
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.858 0.706
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.858 0.706
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH

DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.841 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1630671g001 bHLH 158 208

Links

Other bHLH family TFs
Other Phoenix dactylifera TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo01093s010 Brassica oleracea Bo01093s010 N
Bo01167s020 Brassica oleracea Bo01167s020 N
Bo08089s010 Brassica oleracea Bo08089s010 N
Bo1g053550 Brassica oleracea Bo1g053550 N
Bo2g134150 Brassica oleracea Bo2g134150 N
Bo3g030260 Brassica oleracea Bo3g030260 N
Bo3g078620 Brassica oleracea Bo3g078620 N
Bo3g091380 Brassica oleracea Bo3g091380 N
Bo3g155400 Brassica oleracea Bo3g155400 N
Bo4g117120 Brassica oleracea Bo4g117120 N
Bo4g154600 Brassica oleracea Bo4g154600 N
Bo4g161430 Brassica oleracea Bo4g161430 N
Bo4g162580 Brassica oleracea Bo4g162580 N
Bo4g173170 Brassica oleracea Bo4g173170 N
Bo4g178110 Brassica oleracea Bo4g178110 N
Bo5g034250 Brassica oleracea Bo5g034250 N
Bo5g041280 Brassica oleracea Bo5g041280 N
Bo6g087610 Brassica oleracea Bo6g087610 N
Bo7g016140 Brassica oleracea Bo7g016140 N
Bo7g043390 Brassica oleracea Bo7g043390 N
Bo7g064790 Brassica oleracea Bo7g064790 N
Bo7g065750 Brassica oleracea Bo7g065750 N
Bo7g067460 Brassica oleracea Bo7g067460 N
Bo7g093290 Brassica oleracea Bo7g093290 N
Bo7g101500 Brassica oleracea Bo7g101500 N
Bo8g066500 Brassica oleracea Bo8g066500 N
Bo9g140760 Brassica oleracea Bo9g140760 N