CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1630671g001
(
Phoenix dactylifera
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
PDK_20s1630671g001
T052270_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.899
0.804
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.864
0.804
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.864
0.804
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.858
0.706
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.858
0.706
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.841
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1630671g001
bHLH
158
208
ATHPRSVAERERRTRISEKLKKLQDFVPNMDKQTNTADMLDLAVQHIKSLQ
Links
Other
bHLH
family TFs
Other
Phoenix dactylifera
TFs
242 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo01093s010
Brassica oleracea
Bo01093s010
N
Bo01167s020
Brassica oleracea
Bo01167s020
N
Bo08089s010
Brassica oleracea
Bo08089s010
N
Bo1g053550
Brassica oleracea
Bo1g053550
N
Bo2g134150
Brassica oleracea
Bo2g134150
N
Bo3g030260
Brassica oleracea
Bo3g030260
N
Bo3g078620
Brassica oleracea
Bo3g078620
N
Bo3g091380
Brassica oleracea
Bo3g091380
N
Bo3g155400
Brassica oleracea
Bo3g155400
N
Bo4g117120
Brassica oleracea
Bo4g117120
N
Bo4g154600
Brassica oleracea
Bo4g154600
N
Bo4g161430
Brassica oleracea
Bo4g161430
N
Bo4g162580
Brassica oleracea
Bo4g162580
N
Bo4g173170
Brassica oleracea
Bo4g173170
N
Bo4g178110
Brassica oleracea
Bo4g178110
N
Bo5g034250
Brassica oleracea
Bo5g034250
N
Bo5g041280
Brassica oleracea
Bo5g041280
N
Bo6g087610
Brassica oleracea
Bo6g087610
N
Bo7g016140
Brassica oleracea
Bo7g016140
N
Bo7g043390
Brassica oleracea
Bo7g043390
N
Bo7g064790
Brassica oleracea
Bo7g064790
N
Bo7g065750
Brassica oleracea
Bo7g065750
N
Bo7g067460
Brassica oleracea
Bo7g067460
N
Bo7g093290
Brassica oleracea
Bo7g093290
N
Bo7g101500
Brassica oleracea
Bo7g101500
N
Bo8g066500
Brassica oleracea
Bo8g066500
N
Bo9g140760
Brassica oleracea
Bo9g140760
N