CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LLOJ009485
(
Lutzomyia longipalpis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
LLOJ009485
T053191_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tfap4
M01717_2.00
Mus musculus
VHCABVYGB
VCRBVTGDB
PBM
Weirauch et al.(2014)
pTH5067
0.884
0.808
TFAP4
M02776_2.00
Homo sapiens
AWCAGCTGWY
RWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_1
0.884
0.808
TFAP4
M02777_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_2
0.884
0.808
TFAP4
M04066_2.00
Homo sapiens
VHCAKVTGDB
VHCABMTGDB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1
0.884
0.808
TFAP4
M04067_2.00
Homo sapiens
VWCAGCTGWB
VWCAGCTGWB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2
0.884
0.808
TFAP4
M04070_2.00
Homo sapiens
RHCAYVTGDB
VHCABRTGDY
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1
0.884
0.808
TFAP4
M04071_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2
0.884
0.808
TFAP4
M08712_2.00
Homo sapiens
VMNCAGCTGR
YCAGCTGNKB
Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A
0.884
0.808
TFAP4
M09453_2.00
Homo sapiens
NVHCAGCTGD
HCAGCTGDBN
Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738
0.884
0.808
TFAP4
M09802_2.00
Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK
Transfac
Matys et al.(2006)
V$AP4_01
0.884
0.808
TFAP4
M09803_2.00
Homo sapiens
NNSAGCTGHB
VDCAGCTSNN
Transfac
Matys et al.(2006)
V$AP4_Q5
0.884
0.808
TFAP4
M09804_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_01
0.884
0.808
TFAP4
M09805_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_02
0.884
0.808
TFAP4
M09806_2.00
Homo sapiens
NVCAGCTGHB
VDCAGCTGBN
Transfac
Matys et al.(2006)
V$AP4_Q6
0.884
0.808
TFAP4
M04068_2.00
Homo sapiens
DHCABMTGDN
NHCAKVTGDH
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1
0.884
0.808
TFAP4
M04069_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2
0.884
0.808
TFAP4
M04072_2.00
Homo sapiens
VHCABVTGDB
VHCABVTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1
0.884
0.808
TFAP4
M04073_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2
0.884
0.808
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.873
0.827
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.873
0.827
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.860
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LLOJ009485-PA
bHLH
50
101
RRQIANSNERRRMQSINAGFQSLRLLLPHHEGEKLSKAAILQQTAEFVYNLE
Links
Other
bHLH
family TFs
Other
Lutzomyia longipalpis
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_204101
Agaricus bisporus
AGABI2DRAFT_204101
N
BOTBODRAFT_74507
Botryobasidium botryosum
BOTBODRAFT_74507
N
CERSUDRAFT_114551
Ceriporiopsis subvermispora
CERSUDRAFT_114551
N
FIBRA_03527
Fibroporia radiculosa
FIBRA_03527
N
FOMPIDRAFT_1061694
Fomitopsis pinicola
FOMPIDRAFT_1061694
N
GALMADRAFT_249226
Galerina marginata
GALMADRAFT_249226
N
gw1.3.911.1
Heterobasidion annosum
gw1.3.911.1
N
HETIRDRAFT_18758
Heterobasidion irregulare
HETIRDRAFT_18758
N
K437DRAFT_223075
Tilletiaria anomala
K437DRAFT_223075
N
M404DRAFT_217927
Pisolithus tinctorius
M404DRAFT_217927
N
M407DRAFT_50255
Tulasnella calospora
M407DRAFT_50255
N
PaG_02114
Pseudozyma aphidis
PaG_02114
N
PAXRUDRAFT_823158
Paxillus rubicundulus
PAXRUDRAFT_823158
N
PFL1_06106
Pseudozyma flocculosa
PFL1_06106
N
PHACADRAFT_73403
Phanerochaete carnosa
PHACADRAFT_73403
N
PHSY_006889
Pseudozyma hubeiensis
PHSY_006889
N
PILCRDRAFT_101673
Piloderma croceum
PILCRDRAFT_101673
N
PISMIDRAFT_675296
Pisolithus microcarpus
PISMIDRAFT_675296
N
SCLCIDRAFT_1208555
Scleroderma citrinum
SCLCIDRAFT_1208555
N
sr11829
Sporisorium reilianum
sr11829
N
UHOR_00851
Ustilago hordei
UHOR_00851
N
UM00551
Ustilago maydis
UM00551
N