csin111822 (Clonorchis sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 csin111822 T053678_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.855 0.769
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.855 0.769
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.855 0.769
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.855 0.769
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.855 0.769
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.855 0.769
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.855 0.769
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.855 0.769
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.855 0.769
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.855 0.769
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.855 0.769
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.855 0.769
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.855 0.769
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.855 0.769
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.855 0.769
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.855 0.769
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin111822 bHLH 26 78

Links

Other bHLH family TFs
Other Clonorchis sinensis TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003932 Aedes aegypti AAEL003932 N 0.000
AALB002527 Anopheles albimanus AALB002527 N 0.000
AARA006596 Anopheles arabiensis AARA006596 N 0.000
AATE012097 Anopheles atroparvus AATE012097 N 0.000
ACEP16657 Atta cephalotes ACEP16657 N 0.000
ACOM028538 Anopheles coluzzii ACOM028538 N 0.000
ADAC002056 Anopheles darlingi ADAC002056 N 0.000
ADIR010659 Anopheles dirus ADIR010659 N 0.000
AEPI000347 Anopheles epiroticus AEPI000347 N 0.000
AFAF005531 Anopheles farauti AFAF005531 N 0.000
AGAP003537 Anopheles gambiae AGAP003537 I 0.000
AMEC020799 Anopheles melas AMEC020799 N 0.000
AMEM015214 Anopheles merus AMEM015214 N 0.000
AQUA001676 Anopheles quadriannulatus AQUA001676 N 0.000
ASTEI09330 Anopheles stephensi ASTEI09330 N 0.000
BGIBMGA007530 Bombyx mori BGIBMGA007530 N 0.000
Cflo_04979--XP_394394.3_APIME Camponotus floridanus Cflo_04979--XP_394394.3_APIME N 0.000
CPIJ009647 Culex quinquefasciatus CPIJ009647 N 0.000
CpipJ_CPIJ009647 Culex pipiens CpipJ_CPIJ009647 N 0.000
ttk Drosophila melanogaster FBgn0003870 D 0.000
ttk Drosophila pseudoobscura FBgn0075017 I 0.000
GF22979 Drosophila ananassae FBgn0099973 N 0.000
GH18647 Drosophila grimshawi FBgn0126114 N 0.000
GI23126 Drosophila mojavensis FBgn0145853 N 0.000
GM16442 Drosophila sechellia FBgn0171357 N 0.000
GJ23100 Drosophila virilis FBgn0210202 N 0.000
GB47057 Apis mellifera GB47057 N 0.000
HMEL015189 Heliconius melpomene HMEL015189 N 0.000
Hsal_07865--XP_394394.3_APIME Harpegnathos saltator Hsal_07865--XP_394394.3_APIME N 0.000
KGM_19333 Danaus plexippus KGM_19333 N 0.000
LDEC015482 Leptinotarsa decemlineata LDEC015482 N 0.000
MCINX010146 Melitaea cinxia MCINX010146 N 0.000
MDOA011489 Musca domestica MDOA011489 N 0.000
MESCA008988 Megaselia scalaris MESCA008988 N 0.000
NV13850 Nasonia vitripennis NV13850 N 0.000
PPAI003518 Phlebotomus papatasi PPAI003518 N 0.000
SINV13243 Solenopsis invicta SINV13243 N 0.000
TC013842 Tribolium castaneum TC013842 N 0.000
YQE_06302 Dendroctonus ponderosae YQE_06302 N 0.000