GPLIN_000941800 (Globodera pallida)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 GPLIN_000941800 T054004_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-11
M00931_2.00 		Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT		 PBM
Grove et al.(2009)
HLH11 		0.852 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000941800 bHLH 123 174

Links

Other bHLH family TFs
Other Globodera pallida TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0001377801 Anisakis simplex ASIM_0001377801 N 0.839
ASU_09033 Ascaris suum ASU_09033 N 0.839
Bm4538 Brugia malayi Bm4538 N 0.845
BTMF_0001307601 Brugia timori BTMF_0001307601 N 0.845
CBN22234 Caenorhabditis brenneri CBN22234 I 0.852
CJA09019 Caenorhabditis japonica CJA09019 I 0.852
CRE25281 Caenorhabditis remanei CRE25281 I 0.852
EEL_0000428401 Elaeophora elaphi EEL_0000428401 N 0.845
GPUH_0001027101 Gongylonema pulchrum GPUH_0001027101 N 0.845
L596_g22298 Steinernema carpocapsae L596_g22298 N 0.839
L889_g27966 Steinernema feltiae L889_g27966 N 0.869
L892_g13807 Steinernema scapterisci L892_g13807 N 0.839
L893_g29299 Steinernema glaseri L893_g29299 N 0.839
L898_g15267 Steinernema monticolum L898_g15267 N 0.839
LOAG_07256 Loa loa LOAG_07256 N 0.845
maker-nMf.1.1.scaf16231-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf16231-snap-gene-0.4 N 0.858
MhA1_Contig993.frz3.gene8 Meloidogyne hapla MhA1_Contig993.frz3.gene8 N 0.858
Minc15230 Meloidogyne incognita Minc15230 N 0.858
nAv.1.0.1.g08834 Acanthocheilonema viteae nAv.1.0.1.g08834 N 0.845
nDi.2.2.2.g07826 Dirofilaria immitis nDi.2.2.2.g07826 N 0.845
nLs.2.1.2.g06012 Litomosoides sigmodontis nLs.2.1.2.g06012 N 0.845
nOo.2.0.1.g02551 Onchocerca ochengi nOo.2.0.1.g02551 N 0.845
TCLT_0000678201 Thelazia callipaeda TCLT_0000678201 I 0.845
TCNE_0001886101 Toxocara canis TCNE_0001886101 N 0.839
hlh-11 Caenorhabditis elegans WBGene00001955 D 0.852
WBGene00244598 Onchocerca volvulus WBGene00244598 N 0.845