HPBE_0002474001 (Heligmosomoides bakeri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 HPBE_0002474001 T054188_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-11
M00931_2.00 		Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT		 PBM
Grove et al.(2009)
HLH11 		0.869 0.865
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.858 0.788
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.858 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0002474001-mRNA-1 bHLH 79 130

Links

Other bHLH family TFs
Other Heligmosomoides bakeri TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECANG7_05482 Echinococcus canadensis ECANG7_05482 N
EmuJ_000768400 Echinococcus multilocularis EmuJ_000768400 N
GPLIN_000941800 Globodera pallida GPLIN_000941800 I
maker-nMf.1.1.scaf16231-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf16231-snap-gene-0.4 N
MhA1_Contig993.frz3.gene8 Meloidogyne hapla MhA1_Contig993.frz3.gene8 N
TASK_0000901601 Taenia asiatica TASK_0000901601 N
TsM_000643400 Taenia solium TsM_000643400 N
TTAC_0000435501 Hydatigera taeniaeformis TTAC_0000435501 N