T265_00953 (Opisthorchis viverrini)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 T265_00953 T055148_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.855 0.769
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.855 0.769
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.855 0.769
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.855 0.769
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.855 0.769
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.855 0.769
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.855 0.769
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.855 0.769
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.855 0.769
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.855 0.769
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.855 0.769
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.855 0.769
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.855 0.769
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.855 0.769
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.855 0.769
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.855 0.769
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T265_00953 bHLH 26 78

Links

Other bHLH family TFs
Other Opisthorchis viverrini TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16040_YML099C Saccharomyces mikatae 16040_YML099C I
17710_YML099C Saccharomyces paradoxus 17710_YML099C I
18194_YML099C Saccharomyces bayanus 18194_YML099C I
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I
CAGL0H06875g Candida glabrata CAGL0H06875g I
CORT_0E00270 Candida orthopsilosis CORT_0E00270 I
CPAG_00315 Candida parapsilosis CPAG_00315 I
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I
e_gww1.1.1.1491.1 Pichia stipitis e_gww1.1.1.1491.1 I
GNLVRS01_PISO0M20692g Millerozyma farinosa GNLVRS01_PISO0M20692g I
GNLVRS01_PISO0N20935g Millerozyma farinosa GNLVRS01_PISO0N20935g I
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I
KLTH0E16500g Lachancea thermotolerans KLTH0E16500g I
KLTH0E16500g Kluyveromyces thermotolerans KLTH0E16500g I
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I
Kpol_455p10 Vanderwaltozyma polyspora Kpol_455p10 I
Kpol_538p52 Vanderwaltozyma polyspora Kpol_538p52 I
Kwal_9688 Kluyveromyces waltii Kwal_9688 I
LELG_04177 Lodderomyces elongisporus LELG_04177 I
NCAS_0C00220 Naumovozyma castellii NCAS_0C00220 I
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I
PGUG_03209 Meyerozyma guilliermondii PGUG_03209 I
PICST_51603 Scheffersomyces stipitis PICST_51603 I
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I
Scas_Contig626.6 Saccharomyces castellii Scas_Contig626.6 I
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I
SU7_2431 Saccharomyces arboricola SU7_2431 I
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I
YALI0_D09647g Yarrowia lipolytica YALI0_D09647g I
ARG81 Saccharomyces cerevisiae YML099C D
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I