TRE_0000636201 (Trichobilharzia regenti)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 TRE_0000636201 T055331_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.855 0.769
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.855 0.769
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.855 0.769
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.855 0.769
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.855 0.769
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.855 0.769
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.855 0.769
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.855 0.769
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.855 0.769
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.855 0.769
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.855 0.769
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.855 0.769
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.855 0.769
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.855 0.769
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.855 0.769
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.855 0.769
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0000636201-mRNA-1 bHLH 69 121

Links

Other bHLH family TFs
Other Trichobilharzia regenti TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003932 Aedes aegypti AAEL003932 N
AALB002527 Anopheles albimanus AALB002527 N
AARA006596 Anopheles arabiensis AARA006596 N
AATE012097 Anopheles atroparvus AATE012097 N
ACEP16657 Atta cephalotes ACEP16657 N
ACOM028538 Anopheles coluzzii ACOM028538 N
ADIR010659 Anopheles dirus ADIR010659 N
AEPI000347 Anopheles epiroticus AEPI000347 N
AFAF005531 Anopheles farauti AFAF005531 N
AGAP003537 Anopheles gambiae AGAP003537 I
AMAM005072 Anopheles maculatus AMAM005072 N
AMEC020799 Anopheles melas AMEC020799 N
AMEM015214 Anopheles merus AMEM015214 N
AQUA001676 Anopheles quadriannulatus AQUA001676 N
ASTEI09330 Anopheles stephensi ASTEI09330 N
BGIBMGA007530 Bombyx mori BGIBMGA007530 N
Cflo_04979--XP_394394.3_APIME Camponotus floridanus Cflo_04979--XP_394394.3_APIME N
CPIJ009647 Culex quinquefasciatus CPIJ009647 N
CpipJ_CPIJ009647 Culex pipiens CpipJ_CPIJ009647 N
ttk Drosophila melanogaster FBgn0003870 D
ttk Drosophila pseudoobscura FBgn0075017 I
GF22979 Drosophila ananassae FBgn0099973 N
GH18647 Drosophila grimshawi FBgn0126114 N
GI23126 Drosophila mojavensis FBgn0145853 N
GM16442 Drosophila sechellia FBgn0171357 N
GJ23100 Drosophila virilis FBgn0210202 N
GB47057 Apis mellifera GB47057 N
HMEL015189 Heliconius melpomene HMEL015189 N
Hsal_07865--XP_394394.3_APIME Harpegnathos saltator Hsal_07865--XP_394394.3_APIME N
KGM_19333 Danaus plexippus KGM_19333 N
LDEC015482 Leptinotarsa decemlineata LDEC015482 N
MCINX010146 Melitaea cinxia MCINX010146 N
MDOA011489 Musca domestica MDOA011489 N
MESCA008988 Megaselia scalaris MESCA008988 N
NV13850 Nasonia vitripennis NV13850 N
PPAI003518 Phlebotomus papatasi PPAI003518 N
SINV13243 Solenopsis invicta SINV13243 N
TC013842 Tribolium castaneum TC013842 N
YQE_06302 Dendroctonus ponderosae YQE_06302 N