CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA013793
(
Oryza indica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BGIOSGA013793
T057128_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EmBP-1
M02659_2.00
Triticum aestivum
CCACGTSW
WSACGTGG
SELEX
Mathelier et al.(2014)
MA0128.1
0.897
0.844
EMBP1_WHEAT
M09921_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_02
0.897
0.844
EMBP1_WHEAT
M09922_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_Q2
0.897
0.844
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.812
0.609
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.812
0.609
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.812
0.609
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.812
0.609
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.812
0.609
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.807
0.641
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.807
0.641
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.795
0.625
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.795
0.625
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.788
0.656
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.788
0.656
Q40645_ORYSA
M10050_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.783
0.609
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.782
0.672
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA013793-PA
bZIP
200
267
ERELKRERRKQSNRESARRSRLRKQQECEELSQKVTELTAVNSTLRTELDKLKKDCEDMEAENSQLMD
Links
Other
bZIP
family TFs
Other
Oryza indica
TFs
181 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_008210
Acremonium chrysogenum
ACRE_008210
N
ANCCAN_16550
Ancylostoma caninum
ANCCAN_16550
N
BOTBODRAFT_174219
Botryobasidium botryosum
BOTBODRAFT_174219
N
BOTBODRAFT_44712
Botryobasidium botryosum
BOTBODRAFT_44712
N
GK21672
Drosophila willistoni
FBgn0223657
N
Genemark.397_g
Heterobasidion annosum
Genemark.397_g
N
HCOI00647600
Haemonchus contortus
HCOI00647600
N
maker-nMf.1.1.scaf01260-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf01260-augustus-gene-0.7
N
Myotis_brandtii_KDM5D_10002268
Myotis brandtii
Myotis_brandtii_KDM5D_10002268
N
OFLC_0000209301
Onchocerca flexuosa
OFLC_0000209301
N
PYU1_G003210
Pythium ultimum
PYU1_G003210
N
Solyc04g025930.1
Solanum lycopersicum
Solyc04g025930.1
N
SVUK_0000804601
Strongylus vulgaris
SVUK_0000804601
N
TC007519
Tribolium castaneum
TC007519
N