Bo3g028300 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo3g028300 T057269_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.846 0.812
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.846 0.812
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.829 0.797
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.829 0.797
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.810 0.656
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.810 0.656
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.810 0.656
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.810 0.656
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.810 0.656
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.797 0.703
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g028300.1 bZIP 285 348

Links

Other bZIP family TFs
Other Brassica oleracea TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_11381 Ancylostoma ceylanicum ANCCEY_11381 N
ANCDUO_12692 Ancylostoma duodenale ANCDUO_12692 N
ASIM_0001118301 Anisakis simplex ASIM_0001118301 N
ASU_11830 Ascaris suum ASU_11830 N
Bm3100 Brugia malayi Bm3100 N
BTMF_0001372201 Brugia timori BTMF_0001372201 N
CBG24087 Caenorhabditis briggsae CBG24087 N
CBN15046 Caenorhabditis brenneri CBN15046 N
CJA09664 Caenorhabditis japonica CJA09664 N
CRE20463 Caenorhabditis remanei CRE20463 N
DICVIV_01724 Dictyocaulus viviparus DICVIV_01724 N
GPUH_0001426001 Gongylonema pulchrum GPUH_0001426001 N
L596_g19739 Steinernema carpocapsae L596_g19739 N
L889_g19003 Steinernema feltiae L889_g19003 N
L892_g30928 Steinernema scapterisci L892_g30928 N
L893_g8389 Steinernema glaseri L893_g8389 N
LOAG_04530 Loa loa LOAG_04530 N
nDi.2.2.2.g03160 Dirofilaria immitis nDi.2.2.2.g03160 N
nOo.2.0.1.g00297 Onchocerca ochengi nOo.2.0.1.g00297 N
OESDEN_14708 Oesophagostomum dentatum OESDEN_14708 N
OFLC_0001424701 Onchocerca flexuosa OFLC_0001424701 N
PEQ_0000498301 Parascaris equorum PEQ_0000498301 N
PTRK_0001622300 Parastrongyloides trichosuri PTRK_0001622300 N
RSKR_0000760200 Rhabditophanes kr3021 RSKR_0000760200 N
scaffold198-EXSNAP2012.12 Pristionchus exspectatus scaffold198-EXSNAP2012.12 N
SSTP_0001223600 Strongyloides stercoralis SSTP_0001223600 N
SVUK_0000031201 Strongylus vulgaris SVUK_0000031201 N
TCLT_0000237101 Thelazia callipaeda TCLT_0000237101 N
nhr-19 Caenorhabditis elegans WBGene00003618 N
WBGene00247746 Onchocerca volvulus WBGene00247746 N