Bo3g099410 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo3g099410 T057279_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA1
M01788_2.00 		Arabidopsis thaliana
NVTGACGHNN
NNDCGTCABN		 PBM
Weirauch et al.(2014)
pTH7231 		0.798 1.000
TGA1
M01134_2.00 		Arabidopsis thaliana
NVTKACGHNN
NNDCGTMABN		 PBM
Lambert et al.(2019)
pTH7599 		0.798 1.000
TGA1
M06793_2.00 		Arabidopsis thaliana
HNDVTGACGTCAKCD
HGMTGACGTCABHND		 Dap-seq
OMalley et al.(2016)
TGA1_colamp_a 		0.798 1.000
TGA1
M06794_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDDH
DHHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA1_col 		0.798 1.000
TGA1
M02657_2.00 		Arabidopsis thaliana
HNACGTCABSV
BSVTGACGTND		 SELEX
Mathelier et al.(2014)
MA0588.1 		0.798 1.000
TGA4
M01786_2.00 		Arabidopsis thaliana
RVTKACGTND
HNACGTMABY		 PBM
Weirauch et al.(2014)
pTH8278 		0.798 0.959
TGA4
M06788_2.00 		Arabidopsis thaliana
TSACGTCAKCD
HGMTGACGTSA		 Dap-seq
OMalley et al.(2016)
TGA4_col_a 		0.798 0.959
TGA4
M06789_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNH
DNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA4_colamp_a 		0.798 0.959
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g099410.1 bZIP 79 127

Links

Other bZIP family TFs
Other Brassica oleracea TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pm.C_sca_36_chr11_2_00006 Nectria haematococca estExt_fgenesh1_pm.C_sca_36_chr11_2_00006 N
FFUJ_10660 Fusarium fujikuroi FFUJ_10660 N
FGRRES_16226 Fusarium graminearum FGRRES_16226 N
FOXG_09704 Fusarium oxysporum FOXG_09704 N
FPSE_01871 Fusarium pseudograminearum FPSE_01871 N