CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra039631
(
Brassica rapa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bra039631
T057533_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.789
0.532
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.789
0.532
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra039631.1-P
bZIP
27
88
DERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQILTSLPVTSELYMKIQAENS
Links
Other
bZIP
family TFs
Other
Brassica rapa
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AATE005226
Anopheles atroparvus
AATE005226
N
0.000
ACOM029903
Anopheles coluzzii
ACOM029903
N
0.000
ADAC001776
Anopheles darlingi
ADAC001776
N
0.000
AEPI001398
Anopheles epiroticus
AEPI001398
N
0.000
AGAP028230
Anopheles gambiae
AGAP028230
N
0.000
AMEC012061
Anopheles melas
AMEC012061
N
0.000
AQUA003528
Anopheles quadriannulatus
AQUA003528
N
0.000
ASIS017063
Anopheles sinensis
ASIS017063
N
0.000
ASTEI03736
Anopheles stephensi
ASTEI03736
N
0.000