CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10026193
(
Crassostrea gigas
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
CGI_10026193
T058149_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.808
0.438
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC29859
bZIP
191
254
EEEERRRVKREKNKMAAQKCRSKKRKLADTLEEETMKLEEKQEKLQEEVQKLREEREHLMELLK
Links
Other
bZIP
family TFs
Other
Crassostrea gigas
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28008.m000029
Ricinus communis
28008.m000029
N
Ciclev10010403m.g
Citrus clementina
Ciclev10010403m.g
N
Cla019009
Citrullus lanatus
Cla019009
N
Cucsa.350980
Cucumis sativus
Cucsa.350980
N
Eucgr.C00358
Eucalyptus grandis
Eucgr.C00358
N
Gorai.013G249100
Gossypium raimondii
Gorai.013G249100
N
LjSGA_031594.1
Lotus japonicus
LjSGA_031594.1
N
Lus10036282.g
Linum usitatissimum
Lus10036282.g
N
MDP0000485280
Malus domestica
MDP0000485280
N
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
POPTR_0003s21810
Populus trichocarpa
POPTR_0003s21810
N
SapurV1A.2134s0020
Salix purpurea
SapurV1A.2134s0020
N
VIT_11s0037g00010
Vitis vinifera
VIT_11s0037g00010
N