CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000012233
(
Lepisosteus oculatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSLOCG00000012233
T060111_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.896
0.953
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.896
0.953
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.896
0.953
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.896
0.953
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.896
0.953
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.896
0.953
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.896
0.953
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.896
0.953
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.847
0.766
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.847
0.766
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.847
0.766
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.847
0.766
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.847
0.766
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.847
0.766
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.847
0.766
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.847
0.766
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.847
0.766
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.795
0.672
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.795
0.672
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000015046
bZIP
226
289
MKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRAGFLEKENSALRQEVADLRKELGRCKNILA
Links
Other
bZIP
family TFs
Other
Lepisosteus oculatus
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AUEXF2481DRAFT_152
Aureobasidium subglaciale
AUEXF2481DRAFT_152
N
0.000
CIMG_01608
Coccidioides immitis
CIMG_01608
N
0.000
CPC735_048660
Coccidioides posadasii
CPC735_048660
N
0.000
F503_05646
Ophiostoma piceae uamh
F503_05646
N
0.000
fgenesh1_pg.C_scaffold_1000879
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_1000879
N
0.000
HMPREF1624_02273
Sporothrix schenckii
HMPREF1624_02273
N
0.000
LEMA_P055840.1
Leptosphaeria maculans
LEMA_P055840.1
N
0.000
M437DRAFT_77772
Aureobasidium melanogenum
M437DRAFT_77772
N
0.000
M438DRAFT_349770
Aureobasidium pullulans
M438DRAFT_349770
N
0.000
MYCFIDRAFT_76004
Pseudocercospora fijiensis
MYCFIDRAFT_76004
N
0.000
SAPIO_CDS0057
Scedosporium apiospermum
SAPIO_CDS0057
N
0.000