CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ATF6
(
Macaca mulatta
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSMMUG00000004049
T060293_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.885
1.000
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.885
1.000
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.885
1.000
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK
MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.885
1.000
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.885
1.000
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY
RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.885
1.000
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.885
1.000
ATF6
M09947_2.00
Homo sapiens
TGACGTGG
CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.885
1.000
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.885
1.000
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.885
1.000
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.832
0.635
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.832
0.635
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.832
0.635
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.832
0.635
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.832
0.635
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC
GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.832
0.635
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT
ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.832
0.635
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.832
0.635
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.832
0.635
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000005411
bZIP
239
301
AVLRRQQRMIKNRESACQSRKKKKEYMLGLEARLKAALSENEQLKKENGTLKRQLDEVVSENQ
Links
Other
bZIP
family TFs
Other
Macaca mulatta
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_143213
Agaricus bisporus
AGABI2DRAFT_143213
N
BN946_scf184985.g64
Trametes cinnabarina
BN946_scf184985.g64
N
BOTBODRAFT_62341
Botryobasidium botryosum
BOTBODRAFT_62341
N
CERSUDRAFT_118233
Ceriporiopsis subvermispora
CERSUDRAFT_118233
N
CY34DRAFT_811362
Suillus luteus
CY34DRAFT_811362
N
DICSQDRAFT_163481
Dichomitus squalens
DICSQDRAFT_163481
N
fgenesh1_pg.C_scaffold_4000408
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000408
N
fgenesh2_pg.C_scaffold_14000115
Heterobasidion annosum
fgenesh2_pg.C_scaffold_14000115
N
GALMADRAFT_46548
Galerina marginata
GALMADRAFT_46548
N
GLOTRDRAFT_138787
Gloeophyllum trabeum
GLOTRDRAFT_138787
N
HETIRDRAFT_431082
Heterobasidion irregulare
HETIRDRAFT_431082
N
JAAARDRAFT_196106
Jaapia argillacea
JAAARDRAFT_196106
N
K443DRAFT_671746
Laccaria amethystina
K443DRAFT_671746
N
LACBIDRAFT_296378
Laccaria bicolor
LACBIDRAFT_296378
N
M378DRAFT_70504
Amanita muscaria
M378DRAFT_70504
N
M413DRAFT_73437
Hebeloma cylindrosporum
M413DRAFT_73437
N
Moror_17790
Moniliophthora roreri
Moror_17790
N
PAXINDRAFT_99404
Paxillus involutus
PAXINDRAFT_99404
N
PAXRUDRAFT_827663
Paxillus rubicundulus
PAXRUDRAFT_827663
N
PHACADRAFT_260024
Phanerochaete carnosa
PHACADRAFT_260024
N
PHLGIDRAFT_365607
Phlebiopsis gigantea
PHLGIDRAFT_365607
N
PIIN_06096
Piriformospora indica
PIIN_06096
N
PILCRDRAFT_820497
Piloderma croceum
PILCRDRAFT_820497
N
PISMIDRAFT_102688
Pisolithus microcarpus
PISMIDRAFT_102688
N
PLEOSDRAFT_1112913
Pleurotus ostreatus
PLEOSDRAFT_1112913
N
SCHCODRAFT_236086
Schizophyllum commune
SCHCODRAFT_236086
N
SCLCIDRAFT_1213805
Scleroderma citrinum
SCLCIDRAFT_1213805
N
SERLA73DRAFT_159500
Serpula lacrymans
SERLA73DRAFT_159500
N