atf3 (Oryzias latipes)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSORLG00000019980 T060908_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.892 0.810
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.892 0.810
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.892 0.810
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.879 0.698
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.879 0.698
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.879 0.698
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.879 0.698
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.879 0.698
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.879 0.698
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.879 0.698
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.879 0.698
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.879 0.698
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.879 0.698
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.879 0.698
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.879 0.698
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.875 0.683
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.875 0.683
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.875 0.683
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.875 0.683
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.875 0.683
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.808 0.460
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.808 0.460
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.808 0.460
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.808 0.460
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.808 0.460
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.808 0.460
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.808 0.460
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.808 0.460
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.808 0.460
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.808 0.460
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.808 0.460
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.808 0.460
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.808 0.460
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.808 0.460
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.808 0.460
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.808 0.460
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.808 0.460
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.808 0.460
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.808 0.460
Atf3
M03648_2.00 		Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Nitta et al.(2015)
Atf3_1 		0.791 0.571
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000024805 bZIP 88 150

Links

Other bZIP family TFs
Other Oryzias latipes TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_01545 Beauveria bassiana BBA_01545 N
BGHDH14_bgh04116 Blumeria graminis BGHDH14_bgh04116 N
ACLA_039280 Aspergillus clavatus CADACLAG00003549 N
CCM_00998 Cordyceps militaris CCM_00998 N
CGGC5_3996 Colletotrichum gloeosporioides CGGC5_3996 N
CH063_07308 Colletotrichum higginsianum CH063_07308 N
Cob_01816 Colletotrichum orbiculare Cob_01816 N
CPUR_00596 Claviceps purpurea CPUR_00596 N
CSUB01_04200 Colletotrichum sublineola CSUB01_04200 N
CTHT_0020070 Chaetomium thermophilum CTHT_0020070 N
estExt_fgenesh1_kg.C_80107 Cryphonectria parasitica estExt_fgenesh1_kg.C_80107 N
estExt_Genewise1.C_90051 Neurospora discreta estExt_Genewise1.C_90051 N
estExt_Genewise1.C_sca_3_chr4_2_00632 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00632 N
FFUJ_13265 Fusarium fujikuroi FFUJ_13265 N
FGRRES_06071 Fusarium graminearum FGRRES_06071 N
FOXG_07781 Fusarium oxysporum FOXG_07781 N
FPSE_04226 Fusarium pseudograminearum FPSE_04226 N
FVEG_04708 Fusarium verticillioides FVEG_04708 N
GLRG_10810 Colletotrichum graminicola GLRG_10810 N
MAC_09480 Metarhizium acridum MAC_09480 N
MAJ_05808 Metarhizium majus MAJ_05808 N
MANI_012588 Metarhizium anisopliae MANI_012588 N
MGU_04765 Metarhizium guizhouense MGU_04765 N
MYCTH_2305929 Myceliophthora thermophila MYCTH_2305929 N
NCU05891 Neurospora crassa NCU05891 N
NechaG60026 Fusarium solani NechaG60026 N
NEUTE1DRAFT_86802 Neurospora tetrasperma NEUTE1DRAFT_86802 N
OCS_06782 Ophiocordyceps sinensis OCS_06782 N
PVAR5_7731 Byssochlamys spectabilis PVAR5_7731 N
THITE_2067650 Thielavia terrestris THITE_2067650 N
TRIREDRAFT_77609 Trichoderma reesei TRIREDRAFT_77609 N
UCRPA7_6046 Togninia minima UCRPA7_6046 N
UREG_07450 Uncinocarpus reesii UREG_07450 N
UV8b_5421 Ustilaginoidea virens UV8b_5421 N
VDAG_09953 Verticillium dahliae VDAG_09953 N
VDBG_03434 Verticillium alfalfae VDBG_03434 N
VDBG_03434 Verticillium albo atrum VDBG_03434 N
X797_001129 Metarhizium robertsii X797_001129 N