CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000011124
(
Pongo abelii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSPPYG00000011124
T061134_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.906
1.000
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.906
1.000
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.906
1.000
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.906
1.000
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.906
1.000
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.906
1.000
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.906
1.000
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.906
1.000
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.906
1.000
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.906
1.000
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.906
1.000
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.906
1.000
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.906
1.000
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.906
1.000
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.906
1.000
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.898
0.968
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.898
0.968
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.898
0.968
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.898
0.968
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.898
0.968
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.898
0.968
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.898
0.968
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.898
0.968
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.898
0.968
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.898
0.968
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.898
0.968
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA
TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.844
0.726
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB
VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.844
0.726
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN
NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.844
0.726
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY
RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.844
0.726
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN
NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.844
0.726
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB
VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.844
0.726
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN
NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.844
0.726
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN
NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.844
0.726
CEBPA
M10025_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.844
0.726
CEBPA
M10026_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.844
0.726
CEBPA
M10027_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.844
0.726
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD
HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.844
0.726
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN
NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.844
0.726
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.844
0.726
CEBPE
M02824_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPE_1
0.824
0.758
CEBPE
M02729_2.00
Homo sapiens
VTTDYRHAAY
RTTDYRHAAB
SELEX
Jolma et al.(2010)
CEBPE_dimer
0.824
0.758
CEBPE
M04227_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX
0.824
0.758
CEBPE
M04009_2.00
Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1
0.824
0.758
CEBPE
M08783_2.00
Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A
0.824
0.758
CEBPE
M09927_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_01
0.824
0.758
CEBPE
M09928_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6_01
0.824
0.758
CEBPE
M09929_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6
0.824
0.758
CEBPE
M04228_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX
0.824
0.758
Cebpe
M01815_2.00
Mus musculus
TKDYGCAA
TTGCRHMA
PBM
Weirauch et al.(2014)
pTH5253
0.822
0.726
Cebpe
M08836_2.00
Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A
0.822
0.726
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000012431
bZIP
271
332
SDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFK
Links
Other
bZIP
family TFs
Other
Pongo abelii
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30170.m013776
Ricinus communis
30170.m013776
I
Aquca_006_00074
Aquilegia coerulea
Aquca_006_00074
I
Aquca_014_00554
Aquilegia coerulea
Aquca_014_00554
I
BGIOSGA007333
Oryza indica
BGIOSGA007333
I
BGIOSGA026745
Oryza indica
BGIOSGA026745
I
MADS56
Oryza indica
BGIOSGA033356
I
cassava25616.m1
Manihot esculenta
cassava25616.m1
I
Ca_01572
Cicer arietinum
Ca_01572
I
Ciclev10001730m.g
Citrus clementina
Ciclev10001730m.g
I
Cla014721
Citrullus lanatus
Cla014721
I
estExt_fgenesh1_pg.C_1180093
Physcomitrella patens
estExt_fgenesh1_pg.C_1180093
I
estExt_fgenesh1_pm.C_80015
Physcomitrella patens
estExt_fgenesh1_pm.C_80015
I
estExt_gwp_gw1.C_1630046
Physcomitrella patens
estExt_gwp_gw1.C_1630046
I
estExt_gwp_gw1.C_900087
Physcomitrella patens
estExt_gwp_gw1.C_900087
I
evm.TU.supercontig_21.133
Carica papaya
evm.TU.supercontig_21.133
I
e_gw1.55.5.1
Physcomitrella patens
e_gw1.55.5.1
I
F775_08627
Aegilops tauschii
F775_08627
I
fgenesh1_pg.scaffold_163000049
Physcomitrella patens
fgenesh1_pg.scaffold_163000049
I
GLYMA04G04641
Glycine max
GLYMA04G04641
I
Gorai.005G100600
Gossypium raimondii
Gorai.005G100600
I
Gorai.009G216900
Gossypium raimondii
Gorai.009G216900
I
GSMUA_Achr3G04450_001
Musa acuminata
GSMUA_Achr3G04450_001
I
LPERR03G01640
Leersia perrieri
LPERR03G01640
I
LPERR08G16000
Leersia perrieri
LPERR08G16000
I
LPERR10G12950
Leersia perrieri
LPERR10G12950
I
Lus10018714.g
Linum usitatissimum
Lus10018714.g
I
Lus10024823.g
Linum usitatissimum
Lus10024823.g
I
mgf005831m
Mimulus guttatus
mgf005831m
I
mgf025860m
Mimulus guttatus
mgf025860m
N
MTR_8g033220
Medicago truncatula
MTR_8g033220
I
OB03G11760
Oryza brachyantha
OB03G11760
I
OB10G24040
Oryza brachyantha
OB10G24040
I
OBART03G01800
Oryza barthii
OBART03G01800
I
OBART08G19110
Oryza barthii
OBART08G19110
I
OBART10G16960
Oryza barthii
OBART10G16960
I
OGLUM03G01750
Oryza glumaepatula
OGLUM03G01750
I
OGLUM08G20110
Oryza glumaepatula
OGLUM08G20110
I
OGLUM10G16960
Oryza glumaepatula
OGLUM10G16960
I
OLONG_010918
Oryza longistaminata
OLONG_010918
I
OLONG_017665
Oryza longistaminata
OLONG_017665
I
OMERI03G01730
Oryza meridionalis
OMERI03G01730
I
OMERI10G13430
Oryza meridionalis
OMERI10G13430
I
ONIVA03G01420
Oryza nivara
ONIVA03G01420
I
ONIVA10G18680
Oryza nivara
ONIVA10G18680
I
OPUNC03G01630
Oryza punctata
OPUNC03G01630
I
OPUNC08G17110
Oryza punctata
OPUNC08G17110
I
OPUNC10G15300
Oryza punctata
OPUNC10G15300
I
orange1.1g046530m.g
Citrus sinensis
orange1.1g046530m.g
I
ORGLA03G0015400
Oryza glaberrima
ORGLA03G0015400
I
ORGLA08G0167200
Oryza glaberrima
ORGLA08G0167200
I
ORGLA10G0119200
Oryza glaberrima
ORGLA10G0119200
I
ORUFI03G01510
Oryza rufipogon
ORUFI03G01510
I
ORUFI08G21330
Oryza rufipogon
ORUFI08G21330
I
ORUFI10G17990
Oryza rufipogon
ORUFI10G17990
I
MADS50
Oryza sativa
OS03G0122600
D
OS08G0494100
Oryza sativa
OS08G0494100
I
MADS56
Oryza sativa
OS10G0536100
I
Pavir.Fb01739
Panicum virgatum
Pavir.Fb01739
I
Pavir.J32837
Panicum virgatum
Pavir.J32837
I
Pm005355
Prunus mume
Pm005355
I
POPTR_0002s09290
Populus trichocarpa
POPTR_0002s09290
I
POPTR_0007s02770
Populus trichocarpa
POPTR_0007s02770
N
PRUPE_ppa020874mg
Prunus persica
PRUPE_ppa020874mg
I
PRUPE_ppa023054mg
Prunus persica
PRUPE_ppa023054mg
I
SapurV1A.0010s0340
Salix purpurea
SapurV1A.0010s0340
I
Si013985m.g
Setaria italica
Si013985m.g
I
TCM_007787
Theobroma cacao
TCM_007787
N
Traes_4DL_5633C0561
Triticum aestivum
Traes_4DL_5633C0561
I