CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTNIG00000003545
(
Tetraodon nigroviridis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSTNIG00000003545
T061589_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.856
0.900
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.856
0.900
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.856
0.900
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.856
0.900
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.856
0.900
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.856
0.900
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.856
0.900
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.856
0.900
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.836
0.767
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.836
0.767
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.836
0.767
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.836
0.767
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.836
0.767
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.836
0.767
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.836
0.767
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.836
0.767
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.836
0.767
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000006134
bZIP
88
147
RYWARRRKNNVAAKRSRDARRLKENQIAIRASFLEKENAALRVEVADIRKELGRCKNILA
Links
Other
bZIP
family TFs
Other
Tetraodon nigroviridis
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_089030
Trichomonas vaginalis
TVAG_089030
N
0.000
TVAG_189350
Trichomonas vaginalis
TVAG_189350
N
0.000
TVAG_213050
Trichomonas vaginalis
TVAG_213050
N
0.000
TVAG_232920
Trichomonas vaginalis
TVAG_232920
N
0.000
TVAG_267720
Trichomonas vaginalis
TVAG_267720
N
0.000
TVAG_271450
Trichomonas vaginalis
TVAG_271450
N
0.000
TVAG_313450
Trichomonas vaginalis
TVAG_313450
N
0.000
TVAG_316440
Trichomonas vaginalis
TVAG_316440
N
0.000
TVAG_320900
Trichomonas vaginalis
TVAG_320900
N
0.000
TVAG_368380
Trichomonas vaginalis
TVAG_368380
N
0.000
TVAG_374420
Trichomonas vaginalis
TVAG_374420
N
0.000
TVAG_403490
Trichomonas vaginalis
TVAG_403490
N
0.000
TVAG_451680
Trichomonas vaginalis
TVAG_451680
N
0.000
TVAG_488290
Trichomonas vaginalis
TVAG_488290
N
0.000
TVAG_492630
Trichomonas vaginalis
TVAG_492630
N
0.000
TVAG_509260
Trichomonas vaginalis
TVAG_509260
N
0.000
TVAG_519610
Trichomonas vaginalis
TVAG_519610
N
0.000
TVAG_541710
Trichomonas vaginalis
TVAG_541710
N
0.000
TVAG_546520
Trichomonas vaginalis
TVAG_546520
N
0.000
TVAG_565880
Trichomonas vaginalis
TVAG_565880
N
0.000
TVAG_574420
Trichomonas vaginalis
TVAG_574420
N
0.000
TVAG_590230
Trichomonas vaginalis
TVAG_590230
N
0.000
TVAG_600430
Trichomonas vaginalis
TVAG_600430
N
0.000