CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tefa
(
Takifugu rubripes
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSTRUG00000017028
T061698_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.875
0.794
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.875
0.794
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.875
0.794
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.875
0.794
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.875
0.794
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.875
0.794
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.875
0.794
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.875
0.794
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.875
0.794
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.860
0.778
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.860
0.778
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.860
0.778
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.860
0.778
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.860
0.778
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.860
0.778
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.860
0.778
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.860
0.778
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000043608
bZIP
208
270
KKDDKYWQRRKKNNMAAKRSRDARRLKENQITVRAAFLERENAALRTEVADLRKECGRYKNVV
ENSTRUP00000043609
bZIP
224
286
KKDDKYWQRRKKNNMAAKRSRDARRLKENQITVRAAFLERENAALRTEVADLRKECGRYKNVV
ENSTRUP00000043610
bZIP
229
291
KKDDKYWQRRKKNNMAAKRSRDARRLKENQITVRAAFLERENAALRTEVADLRKECGRYKNVV
Links
Other
bZIP
family TFs
Other
Takifugu rubripes
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R005501
Calypte anna
Aan_R005501
N
0.000
ACYPI005198
Acyrthosiphon pisum
ACYPI005198
I
0.000
Afo_R015384
Aptenodytes forsteri
Afo_R015384
N
0.000
Alligator_sinensis_CCG000560.1
Alligator sinensis
Alligator_sinensis_CCG000560.1
N
0.000
Alligator_sinensis_CCG019430.1
Alligator sinensis
Alligator_sinensis_CCG019430.1
I
0.000
Cmyd_10006239
Chelonia mydas
Cmyd_10006239
I
0.000
MXD1
Anolis carolinensis
ENSACAG00000006004
I
0.000
MXD4
Anolis carolinensis
ENSACAG00000007819
N
0.000
ENSAMEG00000014340
Ailuropoda melanoleuca
ENSAMEG00000014340
N
0.000
ENSAMEG00000016108
Ailuropoda melanoleuca
ENSAMEG00000016108
I
0.000
ENSAPLG00000004997
Anas platyrhynchos
ENSAPLG00000004997
N
0.000
ENSAPLG00000009927
Anas platyrhynchos
ENSAPLG00000009927
N
0.000
MXD1
Bos taurus
ENSBTAG00000001042
I
0.000
MXD4
Bos taurus
ENSBTAG00000015209
N
0.000
MXD4
Canis familiaris
ENSCAFG00000014873
N
0.000
MXD1
Canis familiaris
ENSCAFG00000032746
I
0.000
MXD1
Choloepus hoffmanni
ENSCHOG00000003047
I
0.000
MXD1
Callithrix jacchus
ENSCJAG00000019266
I
0.000
ENSCPOG00000007162
Cavia porcellus
ENSCPOG00000007162
I
0.000
MXD4
Cavia porcellus
ENSCPOG00000022492
N
0.000
ENSCSAG00000015119
Chlorocebus sabaeus
ENSCSAG00000015119
I
0.000
ENSCSAG00000015741
Chlorocebus sabaeus
ENSCSAG00000015741
N
0.000
mxi1
Danio rerio
ENSDARG00000040884
I
0.000
mxd4
Danio rerio
ENSDARG00000054031
N
0.000
MXD1
Dasypus novemcinctus
ENSDNOG00000034010
I
0.000
ENSDORG00000001608
Dipodomys ordii
ENSDORG00000001608
I
0.000
MXD1
Equus caballus
ENSECAG00000011257
I
0.000
MXD1
Echinops telfairi
ENSETEG00000017347
I
0.000
ENSFALG00000000117
Ficedula albicollis
ENSFALG00000000117
N
0.000
ENSFALG00000009868
Ficedula albicollis
ENSFALG00000009868
N
0.000
MXD4
Felis catus
ENSFCAG00000012927
N
0.000
MXD1
Felis catus
ENSFCAG00000030345
I
0.000
MXD1
Homo sapiens
ENSG00000059728
I
0.000
MXD4
Homo sapiens
ENSG00000123933
N
0.000
mxd4
Gasterosteus aculeatus
ENSGACG00000017587
N
0.000
MXD1
Gallus gallus
ENSGALG00000013882
I
0.000
MXD4
Gallus gallus
ENSGALG00000015688
N
0.000
MXD4
Gorilla gorilla
ENSGGOG00000000747
N
0.000
MXD1
Gorilla gorilla
ENSGGOG00000011287
I
0.000
ENSLACG00000006663
Latimeria chalumnae
ENSLACG00000006663
N
0.000
ENSLACG00000017438
Latimeria chalumnae
ENSLACG00000017438
I
0.000
MXD4
Loxodonta africana
ENSLAFG00000026709
N
0.000
ENSLOCG00000002303
Lepisosteus oculatus
ENSLOCG00000002303
N
0.000
ENSLOCG00000015320
Lepisosteus oculatus
ENSLOCG00000015320
I
0.000
ENSMEUG00000013693
Macropus eugenii
ENSMEUG00000013693
I
0.000
MXD1
Meleagris gallopavo
ENSMGAG00000003405
I
0.000
MXD4
Meleagris gallopavo
ENSMGAG00000013027
N
0.000
MXD1
Myotis lucifugus
ENSMLUG00000016646
N
0.000
ENSMMUG00000001160
Macaca mulatta
ENSMMUG00000001160
N
0.000
ENSMMUG00000010226
Macaca mulatta
ENSMMUG00000010226
I
0.000
MXD1
Monodelphis domestica
ENSMODG00000011481
I
0.000
ENSMPUG00000007107
Mustela putorius furo
ENSMPUG00000007107
I
0.000
ENSMPUG00000010989
Mustela putorius furo
ENSMPUG00000010989
N
0.000
Mxd1
Mus musculus
ENSMUSG00000001156
I
0.000
Mxd4
Mus musculus
ENSMUSG00000037235
N
0.000
ENSNLEG00000010141
Nomascus leucogenys
ENSNLEG00000010141
I
0.000
ENSOARG00000019742
Ovis aries
ENSOARG00000019742
I
0.000
MXD1
Oryctolagus cuniculus
ENSOCUG00000015820
I
0.000
MXD1
Otolemur garnettii
ENSOGAG00000008412
I
0.000
MXD4
Otolemur garnettii
ENSOGAG00000011305
N
0.000
ENSONIG00000015871
Oreochromis niloticus
ENSONIG00000015871
I
0.000
ENSONIG00000017548
Oreochromis niloticus
ENSONIG00000017548
N
0.000
mxd4
Oryzias latipes
ENSORLG00000006439
N
0.000
mxd1
Oryzias latipes
ENSORLG00000015461
I
0.000
ENSP00000264444
Macaca fascicularis
ENSP00000264444
I
0.000
ENSP00000264444-D1
Bos grunniens
ENSP00000264444-D1
I
0.000
ENSP00000337889
Macaca fascicularis
ENSP00000337889
N
0.000
ENSPANG00000000314
Papio anubis
ENSPANG00000000314
I
0.000
ENSPANG00000024535
Papio anubis
ENSPANG00000024535
N
0.000
MXD1
Procavia capensis
ENSPCAG00000001189
I
0.000
ENSPFOG00000004367
Poecilia formosa
ENSPFOG00000004367
I
0.000
ENSPFOG00000011915
Poecilia formosa
ENSPFOG00000011915
N
0.000
ENSPMAG00000001074
Petromyzon marinus
ENSPMAG00000001074
I
0.000
ENSPPYG00000012331
Pongo abelii
ENSPPYG00000012331
I
0.000
ENSPPYG00000014540
Pongo abelii
ENSPPYG00000014540
N
0.000
ENSPSIG00000014955
Pelodiscus sinensis
ENSPSIG00000014955
N
0.000
ENSPSIG00000016320
Pelodiscus sinensis
ENSPSIG00000016320
N
0.000
MXD1
Pan troglodytes
ENSPTRG00000012023
I
0.000
MXD4
Pan troglodytes
ENSPTRG00000015844
N
0.000
MXD1
Pteropus vampyrus
ENSPVAG00000001244
I
0.000
MXD4
Pteropus vampyrus
ENSPVAG00000011169
N
0.000
Mxd4
Rattus norvegicus
ENSRNOG00000015033
N
0.000
Mxd1
Rattus norvegicus
ENSRNOG00000017720
I
0.000
MXD1
Sorex araneus
ENSSARG00000004728
I
0.000
ENSSHAG00000005374
Sarcophilus harrisii
ENSSHAG00000005374
I
0.000
MXD1
Sus scrofa
ENSSSCG00000008334
I
0.000
MXD4
Sus scrofa
ENSSSCG00000008687
N
0.000
ENSSTOG00000000718
Ictidomys tridecemlineatus
ENSSTOG00000000718
I
0.000
ENSSTOG00000028770
Ictidomys tridecemlineatus
ENSSTOG00000028770
N
0.000
MXD1
Tupaia belangeri
ENSTBEG00000005535
I
0.000
MXD4
Taeniopygia guttata
ENSTGUG00000010530
N
0.000
mxd1
Tetraodon nigroviridis
ENSTNIG00000000414
I
0.000
mxd4
Tetraodon nigroviridis
ENSTNIG00000018042
N
0.000
mxd4
Takifugu rubripes
ENSTRUG00000003046
N
0.000
MXD1
Vicugna pacos
ENSVPAG00000001762
I
0.000
ENSXMAG00000004566
Xiphophorus maculatus
ENSXMAG00000004566
I
0.000
ENSXMAG00000005473
Xiphophorus maculatus
ENSXMAG00000005473
N
0.000
fgenesh2_pg.scaffold_205000025
Branchiostoma floridae
fgenesh2_pg.scaffold_205000025
I
0.000
Gfo_R003202
Geospiza fortis
Gfo_R003202
N
0.000
Myotis_brandtii_Mxd1_10023164
Myotis brandtii
Myotis_brandtii_Mxd1_10023164
N
0.000
NV10716
Nasonia vitripennis
NV10716
I
0.000
Ogr05439
Ophisaurus gracilis
Ogr05439
I
0.000
Ogr18275
Ophisaurus gracilis
Ogr18275
N
0.000
Pvit_06637
Pogona vitticeps
Pvit_06637
I
0.000
Pvit_14853
Pogona vitticeps
Pvit_14853
N
0.000
Tal_R007717
Tyto alba
Tal_R007717
N
0.000
tetur09g05570
Tetranychus urticae
tetur09g05570
I
0.000
mxd4.L
Xenopus laevis
XB-GENE-6252709
N
0.000
mxd4.S
Xenopus laevis
XB-GENE-6256011
N
0.000
mxd4
Xenopus tropicalis
XB-GENE-6257573
N
0.000
mxd3
Xenopus tropicalis
XB-GENE-867571
N
0.000
mxd3.L
Xenopus laevis
XB-GENE-867580
N
0.000
mxd1
Xenopus tropicalis
XB-GENE-943715
N
0.000
mxd1.L
Xenopus laevis
XB-GENE-943720
N
0.000