CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TGA3 *(Arabidopsis lyrata)* bZIP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00170 (bZIP_1)	IPR011616	fgenesh2_kg.1__2395__AT1G22070.1	T062345_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TGA3 M01054_2.00	Arabidopsis thaliana	GMTGACG	CGTCAKC	PBM Sullivan et al.(2014) pTH8819	0.786	0.980
TGA3 M06750_2.00	Arabidopsis thaliana	DRTGACGTCAKCD	HGMTGACGTCAYH	Dap-seq OMalley et al.(2016) TGA3_colamp_a	0.786	0.980
TGA3 M06751_2.00	Arabidopsis thaliana	DRTGACGTCAKCDD	HHGMTGACGTCAYH	Dap-seq OMalley et al.(2016) TGA3_col	0.786	0.980
TGA3 M09905_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TGA3_Q2	0.786	0.980
For this family, TFs with SR scores > 0.782* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
fgenesh2_kg.1__2395__AT1G22070.1	bZIP	97	146	INDKMKRRLAQNREAARKSRLRKKVHVQQLEESRLKLSQLEQELVRARQQ

Links
Other bZIP family TFs
Other *Arabidopsis lyrata* TFs