CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g068370.1
(
Solanum lycopersicum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Solyc11g068370.1
T068249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA10
M06783_2.00
Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN
Dap-seq
OMalley et al.(2016)
TGA10_col_a
0.805
0.872
TGA10
M06784_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA10_colamp_a
0.805
0.872
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g068370.1.1
bZIP
67
116
TDAKTLRRLAQNREAARKSRLRKKAYVQQLETSRMRLAQLEQELQRARSQ
Links
Other
bZIP
family TFs
Other
Solanum lycopersicum
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
0.000
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
0.000
F775_19761
Aegilops tauschii
F775_19761
N
0.000
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.000
GRMZM5G832473
Zea mays
GRMZM5G832473
N
0.000
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.000
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
0.000
OBART01G38190
Oryza barthii
OBART01G38190
N
0.000
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
0.000
OGLUM03G09050
Oryza glumaepatula
OGLUM03G09050
N
0.000
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
0.000
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
0.000
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
0.000
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
0.000
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
0.000
OS01G0862800
Oryza sativa
OS01G0862800
N
0.000
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.000
Pavir.J02276
Panicum virgatum
Pavir.J02276
N
0.000
Sb03g040720
Sorghum bicolor
Sb03g040720
N
0.000
Si002586m.g
Setaria italica
Si002586m.g
N
0.000
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.000
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N
0.000