Alligator_sinensis_CCG016908.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG016908.1 T069868_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.869 0.905
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.869 0.905
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.869 0.905
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.869 0.905
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.869 0.905
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.869 0.905
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.869 0.905
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.869 0.905
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.869 0.905
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.869 0.905
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.817 0.635
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.817 0.635
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.817 0.635
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.817 0.635
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.817 0.635
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.817 0.635
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.817 0.635
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.817 0.635
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.817 0.635
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG016908.1 bZIP 1030 1094

Links

Other bZIP family TFs
Other Alligator sinensis TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R010877 Calypte anna Aan_R010877 N
ENSAMEG00000006857 Ailuropoda melanoleuca ENSAMEG00000006857 N
ENSAMXG00000010244 Astyanax mexicanus ENSAMXG00000010244 N
ENSAMXG00000018187 Astyanax mexicanus ENSAMXG00000018187 N
L3MBTL4 Canis familiaris ENSCAFG00000018588 N
L3MBTL4 Choloepus hoffmanni ENSCHOG00000003637 N
ENSCSAG00000017582 Chlorocebus sabaeus ENSCSAG00000017582 N
l3mbtl3 Danio rerio ENSDARG00000025983 N
L3MBTL4 Danio rerio ENSDARG00000094780 N
L3MBTL4 Dasypus novemcinctus ENSDNOG00000006559 N
L3mbtl4 Dipodomys ordii ENSDORG00000013048 N
L3MBTL4 Felis catus ENSFCAG00000031842 N
L3MBTL4 Homo sapiens ENSG00000154655 N
L3MBTL4 Gasterosteus aculeatus ENSGACG00000001138 N
L3MBTL4 Gorilla gorilla ENSGGOG00000015056 N
ENSGMOG00000012699 Gadus morhua ENSGMOG00000012699 N
ENSLACG00000022431 Latimeria chalumnae ENSLACG00000022431 N
ENSLOCG00000003008 Lepisosteus oculatus ENSLOCG00000003008 N
ENSLOCG00000017277 Lepisosteus oculatus ENSLOCG00000017277 N
L3MBTL4 Microcebus murinus ENSMICG00000015626 N
L3MBTL4 Myotis lucifugus ENSMLUG00000002011 N
L3MBTL4 Macaca mulatta ENSMMUG00000016302 N
L3MBTL4 Monodelphis domestica ENSMODG00000021457 N
ENSMPUG00000004964 Mustela putorius furo ENSMPUG00000004964 N
L3mbtl4 Mus musculus ENSMUSG00000041565 N
ENSNLEG00000006925 Nomascus leucogenys ENSNLEG00000006925 N
L3MBTL4 Oryctolagus cuniculus ENSOCUG00000013013 N
L3MBTL4 Otolemur garnettii ENSOGAG00000006203 N
ENSONIG00000015120 Oreochromis niloticus ENSONIG00000015120 N
ENSORLG00000019825 Oryzias latipes ENSORLG00000019825 N
ENSP00000382976 Macaca fascicularis ENSP00000382976 N
ENSPANG00000008894 Papio anubis ENSPANG00000008894 N
ENSPFOG00000009224 Poecilia formosa ENSPFOG00000009224 N
ENSPMAG00000002300 Petromyzon marinus ENSPMAG00000002300 N
ENSPPYG00000009022 Pongo abelii ENSPPYG00000009022 N
L3MBTL4 Pan troglodytes ENSPTRG00000009845 N
L3MBTL4 Pteropus vampyrus ENSPVAG00000002970 N
L3mbtl4 Rattus norvegicus ENSRNOG00000025273 N
L3MBTL4 Sorex araneus ENSSARG00000006794 N
ENSSHAG00000012679 Sarcophilus harrisii ENSSHAG00000012679 N
L3MBTL4 Tetraodon nigroviridis ENSTNIG00000004386 N
L3MBTL4 Takifugu rubripes ENSTRUG00000001294 N
ENSTSYG00000003474 Tarsius syrichta ENSTSYG00000003474 N
L3MBTL4 Tursiops truncatus ENSTTRG00000012966 N
ENSXMAG00000014347 Xiphophorus maculatus ENSXMAG00000014347 N
LotgiG216594 Lottia gigantea LotgiG216594 N
Myotis_brandtii_L3MBTL4_10019905 Myotis brandtii Myotis_brandtii_L3MBTL4_10019905 N
NEMVEDRAFT_v1g187589 Nematostella vectensis NEMVEDRAFT_v1g187589 N
NEMVEDRAFT_v1g20650 Nematostella vectensis NEMVEDRAFT_v1g20650 N
Sakowv30043999m.g Saccoglossus kowalevskii Sakowv30043999m.g N