Gfo_R010938 (Geospiza fortis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gfo_R010938 T070219_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.843 0.828
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.824 0.578
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.824 0.578
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.823 0.891
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.823 0.891
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.823 0.891
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.823 0.891
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.823 0.891
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.823 0.891
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.823 0.891
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.823 0.891
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.823 0.891
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.813 0.562
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.813 0.562
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.813 0.562
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.813 0.562
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.813 0.562
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.813 0.562
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.813 0.562
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.813 0.562
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R010938 bZIP 7 70

Links

Other bZIP family TFs
Other Geospiza fortis TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R005912 Aptenodytes forsteri Afo_R005912 I
Alligator_sinensis_CCG001979.1 Alligator sinensis Alligator_sinensis_CCG001979.1 N
Brh_R007536 Buceros rhinoceros Brh_R007536 N
ZNF521 Anolis carolinensis ENSACAG00000001799 I
ENSAPLG00000003518 Anas platyrhynchos ENSAPLG00000003518 N
ZNF521 Bos taurus ENSBTAG00000007383 I
ENSBTAP00000045301-D1 Bos grunniens ENSBTAP00000045301-D1 I
ZNF521 Callithrix jacchus ENSCJAG00000020691 I
ZNF521 Cavia porcellus ENSCPOG00000015173 I
ENSCSAG00000017805 Chlorocebus sabaeus ENSCSAG00000017805 I
ZNF521 Dasypus novemcinctus ENSDNOG00000040834 I
ZNF521 Erinaceus europaeus ENSEEUG00000006860 I
ENSFALG00000006065 Ficedula albicollis ENSFALG00000006065 I
ZNF521 Homo sapiens ENSG00000198795 D
ZNF521 Gallus gallus ENSGALG00000015112 N
ZNF521 Loxodonta africana ENSLAFG00000013445 I
ZNF521 Meleagris gallopavo ENSMGAG00000010352 N
ZNF521 Microcebus murinus ENSMICG00000006267 I
ZNF521 Macaca mulatta ENSMMUG00000008600 I
ENSMMUP00000028000 Macaca fascicularis ENSMMUP00000028000 I
ZNF521 Monodelphis domestica ENSMODG00000021509 I
Zfp521 Mus musculus ENSMUSG00000024420 I
ENSNLEG00000006568 Nomascus leucogenys ENSNLEG00000006568 I
ENSOARG00000007246 Ovis aries ENSOARG00000007246 N
ZNF521 Oryctolagus cuniculus ENSOCUG00000005774 I
ZNF521 Otolemur garnettii ENSOGAG00000007195 I
ENSPPYG00000009074 Pongo abelii ENSPPYG00000009074 I
ENSPSIG00000002538 Pelodiscus sinensis ENSPSIG00000002538 I
ZNF521 Pan troglodytes ENSPTRG00000022783 I
ZNF521 Pteropus vampyrus ENSPVAG00000015426 N
Zfp521 Rattus norvegicus ENSRNOG00000016874 I
ZNF521 Sorex araneus ENSSARG00000008323 I
ENSSHAG00000018217 Sarcophilus harrisii ENSSHAG00000018217 N
ZNF521 Sus scrofa ENSSSCG00000003715 N
ENSSTOG00000012398 Ictidomys tridecemlineatus ENSSTOG00000012398 I
ENSTSYG00000005246 Tarsius syrichta ENSTSYG00000005246 I
ZNF521 Tursiops truncatus ENSTTRG00000005318 I
Gfo_R012611 Geospiza fortis Gfo_R012611 I
Pvit_18187 Pogona vitticeps Pvit_18187 N
Tal_R008805 Tyto alba Tal_R008805 N