CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0622s0012
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.0622s0012
T071470_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0622s0012.1.p
bZIP
163
225
NDLKRIRRMYSNRESARRSRRRKQEYLVDLESQVDSLKGENSTLYKQLIDATQQFRSAGTNNR
Cagra.0622s0012.2.p
bZIP
164
220
DLKRIRRESARRSRRRKQEYLVDLESQVDSLKGENSTLYKQLIDATQQFRSAGTNNR
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm9831
Brugia malayi
Bm9831
N
BTMF_0000738101
Brugia timori
BTMF_0000738101
N
D918_00980
Trichuris suis
D918_00980
N
DME_0000428901
Dracunculus medinensis
DME_0000428901
N
EEL_0000808101
Elaeophora elaphi
EEL_0000808101
N
L596_g27159
Steinernema carpocapsae
L596_g27159
N
L892_g23853
Steinernema scapterisci
L892_g23853
N
L893_g10963
Steinernema glaseri
L893_g10963
N
LOAG_10192
Loa loa
LOAG_10192
N
nAv.1.0.1.g10245
Acanthocheilonema viteae
nAv.1.0.1.g10245
N
nLs.2.1.2.g01524
Litomosoides sigmodontis
nLs.2.1.2.g01524
N
nOo.2.0.1.g09704
Onchocerca ochengi
nOo.2.0.1.g09704
N
OFLC_0000060901
Onchocerca flexuosa
OFLC_0000060901
N
SBAD_0001324601
Soboliphyme baturini
SBAD_0001324601
N
SMUV_0000932701
Syphacia muris
SMUV_0000932701
N
TMUE_s0106001300
Trichuris muris
TMUE_s0106001300
N
TTRE_0000179301
Trichuris trichiura
TTRE_0000179301
N
WBGene00247281
Onchocerca volvulus
WBGene00247281
N
WUBG_12629
Wuchereria bancrofti
WUBG_12629
N