Cagra.0993s0063 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.0993s0063 T071477_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.893 0.969
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.893 0.969
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.858 0.875
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.858 0.875
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.857 0.734
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.849 0.656
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.849 0.656
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.849 0.656
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.849 0.656
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.849 0.656
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.808 0.641
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.808 0.641
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.803 0.609
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.803 0.609
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.803 0.609
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.801 0.625
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.801 0.609
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.792 0.641
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.791 0.516
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.790 0.594
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.790 0.594
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.788 0.625
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.788 0.625
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.788 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0993s0063.1.p bZIP 301 370
Cagra.0993s0063.2.p bZIP 301 370

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

306 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLOTRDRAFT_122008 Gloeophyllum trabeum GLOTRDRAFT_122008 N
JAAARDRAFT_35629 Jaapia argillacea JAAARDRAFT_35629 N
JAAARDRAFT_367704 Jaapia argillacea JAAARDRAFT_367704 N
LACBIDRAFT_301157 Laccaria bicolor LACBIDRAFT_301157 N
M404DRAFT_23073 Pisolithus tinctorius M404DRAFT_23073 N
M413DRAFT_439142 Hebeloma cylindrosporum M413DRAFT_439142 N
PAXRUDRAFT_822696 Paxillus rubicundulus PAXRUDRAFT_822696 N
PILCRDRAFT_813808 Piloderma croceum PILCRDRAFT_813808 N
PISMIDRAFT_644543 Pisolithus microcarpus PISMIDRAFT_644543 N
SCHCODRAFT_73210 Schizophyllum commune SCHCODRAFT_73210 N
SERLA73DRAFT_80157 Serpula lacrymans SERLA73DRAFT_80157 N