CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.C03986
(
Eucalyptus grandis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Eucgr.C03986
T071683_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.822
0.619
OS02G0266800
M10046_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.821
0.698
CPRF2_PETCR
M10069_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_01
0.782
0.556
CPRF2_PETCR
M10070_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_Q2
0.782
0.556
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.C03986.1
bZIP
160
222
TDLKRIKRMVSNRESARKSRKRKQAHLAELEIQADRLRGENSTLFKQLLDAAQHYRHADTNNR
Eucgr.C03986.2
bZIP
160
222
TDLKRIKRMVSNRESARKSRKRKQAHLAELEIQADRLRGENSTLFKQLLDAAQHYRHADTNNR
Eucgr.C03986.3
bZIP
160
222
TDLKRIKRMVSNRESARKSRKRKQAHLAELEIQADRLRGENSTLFKQLLDAAQHYRHADTNNR
Eucgr.C03986.4
bZIP
160
222
TDLKRIKRMVSNRESARKSRKRKQAHLAELEIQADRLRGENSTLFKQLLDAAQHYRHADTNNR
Eucgr.C03986.5
bZIP
160
222
TDLKRIKRMVSNRESARKSRKRKQAHLAELEIQADRLRGENSTLFKQLLDAAQHYRHADTNNR
Links
Other
bZIP
family TFs
Other
Eucalyptus grandis
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL001033
Aedes aegypti
AAEL001033
N
0.000
AARA009815
Anopheles arabiensis
AARA009815
N
0.000
ACOM024011
Anopheles coluzzii
ACOM024011
N
0.000
ACUA018015
Anopheles culicifacies
ACUA018015
N
0.000
AEPI005532
Anopheles epiroticus
AEPI005532
N
0.000
AGAP003982
Anopheles gambiae
AGAP003982
N
0.000
AMEM005286
Anopheles merus
AMEM005286
N
0.000
AQUA009165
Anopheles quadriannulatus
AQUA009165
N
0.000
ASTEI00983
Anopheles stephensi
ASTEI00983
N
0.000
CPIJ007224
Culex quinquefasciatus
CPIJ007224
N
0.000
CpipJ_CPIJ007224
Culex pipiens
CpipJ_CPIJ007224
N
0.000
DAPPUDRAFT_195138
Daphnia pulex
DAPPUDRAFT_195138
N
0.000