Pavir.Ca00162 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ca00162 T072341_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00162.1.p bZIP 64 137

Links

Other bZIP family TFs
Other Panicum virgatum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA034827 Oryza indica BGIOSGA034827 N 0.853
BGIOSGA034828 Oryza indica BGIOSGA034828 N 0.787
BGIOSGA037021 Oryza indica BGIOSGA037021 N 0.836
F775_21880 Aegilops tauschii F775_21880 N 0.823
GSMUA_Achr5G17460_001 Musa acuminata GSMUA_Achr5G17460_001 N 0.828
GSMUA_Achr9G02570_001 Musa acuminata GSMUA_Achr9G02570_001 N 0.805
LPERR11G02970 Leersia perrieri LPERR11G02970 N 0.853
LPERR12G03230 Leersia perrieri LPERR12G03230 N 0.836
MLOC_15316 Hordeum vulgare MLOC_15316 N 0.823
MLOC_22590 Hordeum vulgare MLOC_22590 N 0.817
OB11G12850 Oryza brachyantha OB11G12850 N 0.853
OB12G13360 Oryza brachyantha OB12G13360 N 0.836
OBART11G03540 Oryza barthii OBART11G03540 N 0.792
OBART12G03450 Oryza barthii OBART12G03450 N 0.836
OGLUM11G03180 Oryza glumaepatula OGLUM11G03180 N 0.853
OGLUM12G04120 Oryza glumaepatula OGLUM12G04120 N 0.836
OLONG_000717 Oryza longistaminata OLONG_000717 N 0.853
OLONG_019285 Oryza longistaminata OLONG_019285 N 0.836
OMERI11G03240 Oryza meridionalis OMERI11G03240 N 0.787
ONIVA07G22930 Oryza nivara ONIVA07G22930 N 0.787
ONIVA12G03070 Oryza nivara ONIVA12G03070 N 0.836
OPUNC11G03240 Oryza punctata OPUNC11G03240 N 0.786
OPUNC12G03250 Oryza punctata OPUNC12G03250 N 0.836
ORGLA11G0032900 Oryza glaberrima ORGLA11G0032900 N 0.787
ORUFI11G03430 Oryza rufipogon ORUFI11G03430 N 0.787
ORUFI12G03900 Oryza rufipogon ORUFI12G03900 N 0.836
OS11G0154900 Oryza sativa OS11G0154900 N 0.853
Pavir.Cb02058 Panicum virgatum Pavir.Cb02058 N 0.877
Pavir.Hb01810 Panicum virgatum Pavir.Hb01810 N 0.799
Pavir.J28001 Panicum virgatum Pavir.J28001 N 0.818
PK09783.1 Cannabis sativa PK09783.1 I 0.792
Sb08g003500 Sorghum bicolor Sb08g003500 N 0.855
Si012481m.g Setaria italica Si012481m.g N 0.874
Si026452m.g Setaria italica Si026452m.g N 0.818
Solyc09g009760.1 Solanum lycopersicum Solyc09g009760.1 I 0.785
Traes_4AL_792F1D482 Triticum aestivum Traes_4AL_792F1D482 N 0.823
Traes_4BS_8439AC445 Triticum aestivum Traes_4BS_8439AC445 N 0.823
Traes_4DS_FAFED0328 Triticum aestivum Traes_4DS_FAFED0328 N 0.823
Traes_5AL_09C375647 Triticum aestivum Traes_5AL_09C375647 N 0.806
Traes_5BL_6C613A3D9 Triticum aestivum Traes_5BL_6C613A3D9 N 0.817
Traes_5DL_A528A05A3 Triticum aestivum Traes_5DL_A528A05A3 N 0.814
TRIUR3_33961 Triticum urartu TRIUR3_33961 N 0.817
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.783