CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J05543
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.J05543
T072449_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J05543.1.p
bZIP
147
200
PDPKMLRRLAQNREAARKSRLRKKAYIQQLESGRIRLAHLEQEMQMARTHQGAL
Pavir.J05543.2.p
bZIP
147
200
PDPKMLRRLAQNREAARKSRLRKKAYIQQLESGRIRLAHLEQEMQMARTHQGAL
Pavir.J05543.3.p
bZIP
147
200
PDPKMLRRLAQNREAARKSRLRKKAYIQQLESGRIRLAHLEQEMQMARTHQGAL
Pavir.J05543.4.p
bZIP
147
200
PDPKMLRRLAQNREAARKSRLRKKAYIQQLESGRIRLAHLEQEMQMARTHQGAL
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G060290
Zea mays
GRMZM2G060290
N
0.786
Pavir.Db00756
Panicum virgatum
Pavir.Db00756
N
0.786
Sb10g024190
Sorghum bicolor
Sb10g024190
N
0.786
Si006417m.g
Setaria italica
Si006417m.g
N
0.786