batf (Xenopus tropicalis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-6258076 T073081_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.829 0.758
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.829 0.758
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.818 0.742
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.818 0.742
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.818 0.742
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.818 0.742
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.818 0.742
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.818 0.742
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.818 0.742
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.818 0.742
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.788 0.613
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.788 0.613
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.788 0.613
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.788 0.613
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.788 0.613
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.788 0.613
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.788 0.613
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.788 0.613
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.788 0.613
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.786 0.629
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002938637 bZIP 25 86

Links

Other bZIP family TFs
Other Xenopus tropicalis TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013250 Ailuropoda melanoleuca ENSAMEG00000013250 I
SALL4 Bos taurus ENSBTAG00000003101 I
ENSCAFG00000011738 Canis familiaris ENSCAFG00000011738 I
ENSCJAG00000000591 Callithrix jacchus ENSCJAG00000000591 I
ENSCSAG00000015269 Chlorocebus sabaeus ENSCSAG00000015269 I
SALL4 Dasypus novemcinctus ENSDNOG00000040633 I
SALL4 Erinaceus europaeus ENSEEUG00000003649 I
SALL4 Felis catus ENSFCAG00000002822 I
SALL4 Homo sapiens ENSG00000101115 D
SALL4 Gorilla gorilla ENSGGOG00000001832 I
SALL4 Loxodonta africana ENSLAFG00000004309 I
SALL4 Microcebus murinus ENSMICG00000000027 I
ENSMLUG00000007060 Myotis lucifugus ENSMLUG00000007060 I
ENSMLUG00000008405 Myotis lucifugus ENSMLUG00000008405 I
SALL4 Macaca mulatta ENSMMUG00000003870 I
ENSMPUG00000017543 Mustela putorius furo ENSMPUG00000017543 I
Sall4 Mus musculus ENSMUSG00000027547 D
ENSNLEG00000007013 Nomascus leucogenys ENSNLEG00000007013 I
SALL4 Oryctolagus cuniculus ENSOCUG00000011797 I
SALL4 Otolemur garnettii ENSOGAG00000013799 I
SALL4 Ochotona princeps ENSOPRG00000011640 I
ENSP00000217086 Macaca fascicularis ENSP00000217086 I
ENSPANG00000021792 Papio anubis ENSPANG00000021792 I
ENSPPYG00000011138 Pongo abelii ENSPPYG00000011138 I
SALL4 Pan troglodytes ENSPTRG00000013631 I
SALL4 Pteropus vampyrus ENSPVAG00000002075 I
Sall4 Rattus norvegicus ENSRNOG00000050035 I
SALL4 Sus scrofa ENSSSCG00000007479 I
ENSSTOG00000025002 Ictidomys tridecemlineatus ENSSTOG00000025002 I
ENSTSYG00000007359 Tarsius syrichta ENSTSYG00000007359 I
SALL4 Tursiops truncatus ENSTTRG00000007753 I