CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_12434
(
Rhizopus oryzae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RO3G_12434
T078210_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_12433
C2H2 ZF
1
16
MVFTRSEHLARHERKH
RO3T_12433
C2H2 ZF
22
46
YKCIIEGCDRRFSRFDNMMQHTQTH
Links
Other
C2H2 ZF
family TFs
Other
Rhizopus oryzae
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_kg.C_20262
Mucor circinelloides
estExt_fgeneshMC_kg.C_20262
N
0.758
estExt_fgeneshMC_kg.C_50047
Mucor circinelloides
estExt_fgeneshMC_kg.C_50047
N
0.758
estExt_Genewise1Plus.C_110080
Mucor circinelloides
estExt_Genewise1Plus.C_110080
N
0.763
fgeneshMC_pg.5_#_815
Mucor circinelloides
fgeneshMC_pg.5_#_815
N
0.756
fgeneshPB_pg.20__150
Phycomyces blakesleeanus
fgeneshPB_pg.20__150
N
0.776
PredSwiss_CON370.1
Pneumocystis carinii
PredSwiss_CON370.1
I
0.767
RO3G_01370
Rhizopus oryzae
RO3G_01370
N
0.782
RO3G_04856
Rhizopus oryzae
RO3G_04856
N
0.763
RO3G_13206
Rhizopus oryzae
RO3G_13206
N
0.787
WALSEDRAFT_53605
Wallemia sebi
WALSEDRAFT_53605
N
0.756