CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGABI2DRAFT_189243
(
Agaricus bisporus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AGABI2DRAFT_189243
T080313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.774
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKV50917
C2H2 ZF
453
478
YLCEVEGCGKCFARGEHLKRHVRSIH
EKV50917
C2H2 ZF
484
508
HRCPYPGCGKDFSRHDNLGQHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Agaricus bisporus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_15877
Aegilops tauschii
F775_15877
N
Traes_7BS_81DFBE52B
Triticum aestivum
Traes_7BS_81DFBE52B
N
Traes_7DS_8B028A5CA
Triticum aestivum
Traes_7DS_8B028A5CA
N
TRIUR3_25861
Triticum urartu
TRIUR3_25861
N