CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00106p00123580
(
Amborella trichopoda
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AMTR_s00106p00123580
T080693_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN00746
C2H2 ZF
136
158
HRCDLCSKSFTSGQALGGHMTIH
ERN00746
C2H2 ZF
180
202
YECMVCKKRFKSSQALGGHMGAH
Links
Other
C2H2 ZF
family TFs
Other
Amborella trichopoda
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0000303501
Anisakis simplex
ASIM_0000303501
N
Hba_16754
Heterorhabditis bacteriophora
Hba_16754
N
L596_g9870
Steinernema carpocapsae
L596_g9870
N
L889_g28628
Steinernema feltiae
L889_g28628
N
L889_g31179
Steinernema feltiae
L889_g31179
N
L893_g27322
Steinernema glaseri
L893_g27322
N
L898_g21213
Steinernema monticolum
L898_g21213
N
L898_g31215
Steinernema monticolum
L898_g31215
N
Ppa-sdc-1
Pristionchus pacificus
PPA24075
N
PTRK_0000173500
Parastrongyloides trichosuri
PTRK_0000173500
N
RSKR_0000130400
Rhabditophanes kr3021
RSKR_0000130400
N
scaffold32-EXSNAP2012.36
Pristionchus exspectatus
scaffold32-EXSNAP2012.36
N
SPAL_0001170200
Strongyloides papillosus
SPAL_0001170200
N
SSTP_0000950300
Strongyloides stercoralis
SSTP_0000950300
N