CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

AZF2 *(Arabidopsis thaliana)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	AT3G19580	T080851_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AZF2 M01854_2.00	Arabidopsis thaliana	NASTRNN	NNYASTN	PBM Weirauch et al.(2014) pTH8258	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZAT9 M06817_2.00	Arabidopsis thaliana	YTACTWHH	DDWAGTAR	Dap-seq OMalley et al.(2016) At3g60580_col_a	0.799	0.739
ZAT4 M01168_2.00	Arabidopsis thaliana	NNHRSTN	NASYDNN	PBM Lambert et al.(2019) pTH11142	0.799	0.717
ZAT6 M00861_2.00	Arabidopsis thaliana	NNHRSTN	NASYDNN	PBM Franco-Zorrilla et al.(2014) ZAT6	0.798	0.870
ZAT10 M01852_2.00	Arabidopsis thaliana	NNHASWN	NWSTDNN	PBM Weirauch et al.(2014) pTH7255	0.791	0.804
ZAT10 M06799_2.00	Arabidopsis thaliana	WSHHCACT	AGTGDDSW	Dap-seq OMalley et al.(2016) STZ_colamp_a	0.791	0.804
ZAT10 M06800_2.00	Arabidopsis thaliana	YWSHNHCASTN	NASTGDNDSWR	Dap-seq OMalley et al.(2016) STZ_col	0.791	0.804
AZF1 M01860_2.00	Arabidopsis thaliana	NWSYDNN	NNHRSWN	PBM Weirauch et al.(2014) pTH7163	0.787	0.783
AZF1 M06826_2.00	Arabidopsis thaliana	WCACTVWCWNH	DNWGWBAGTGW	Dap-seq OMalley et al.(2016) AZF1_colamp_a	0.787	0.783
ZAT1 M01167_2.00	Arabidopsis thaliana	NHRCTNN	NNAGYDN	PBM Lambert et al.(2019) pTH10246	0.776	0.739
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Experimental Constructs

Motif ID	Domain	From	To	Sequence
M01854_2.00	C2H2 ZF	51	73	YKCNVCEKAFPSYQALGGHKASH
M01854_2.00	C2H2 ZF	110	132	HECSICHKVFPTGQALGGHKRCH

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AT3G19580.1	C2H2 ZF	106	128	YKCNVCEKAFPSYQALGGHKASH
AT3G19580.1	C2H2 ZF	165	187	HECSICHKVFPTGQALGGHKRCH
AT3G19580.2	C2H2 ZF	106	128	YKCNVCEKAFPSYQALGGHKASH
AT3G19580.2	C2H2 ZF	165	187	HECSICHKVFPTGQALGGHKRCH

Links
Other C2H2 ZF family TFs
Other *Arabidopsis thaliana* TFs

228 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CIMG_01041	Coccidioides immitis	CIMG_01041	I	0.000
CPC735_053190	Coccidioides posadasii	CPC735_053190	I	0.000