BGIBMGA000607 (Bombyx mori)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BGIBMGA000607 T081218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.801 0.930
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.801 0.930
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.801 0.930
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.801 0.930
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.790 0.833
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.790 0.833
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.790 0.833
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.790 0.833
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.764 0.860
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.764 0.860
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.764 0.860
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.762 0.798
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.762 0.798
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.762 0.798
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA000607-TA C2H2 ZF 133 155
BGIBMGA000607-TA C2H2 ZF 164 186
BGIBMGA000607-TA C2H2 ZF 190 212
BGIBMGA000607-TA C2H2 ZF 218 240
BGIBMGA000607-TA C2H2 ZF 246 267

Links

Other C2H2 ZF family TFs
Other Bombyx mori TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_186054 Agaricus bisporus AGABI2DRAFT_186054 N
BN946_scf185008.g46 Trametes cinnabarina BN946_scf185008.g46 N
CC1G_11570 Coprinopsis cinerea CC1G_11570 N
CERSUDRAFT_112754 Ceriporiopsis subvermispora CERSUDRAFT_112754 N
CY34DRAFT_799337 Suillus luteus CY34DRAFT_799337 N
DACRYDRAFT_105815 Dacryopinax sp DACRYDRAFT_105815 N
fgenesh1_pg.C_scaffold_3000269 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000269 N
FOMPIDRAFT_1162733 Fomitopsis pinicola FOMPIDRAFT_1162733 N
GALMADRAFT_240800 Galerina marginata GALMADRAFT_240800 N
JAAARDRAFT_31242 Jaapia argillacea JAAARDRAFT_31242 N
K443DRAFT_672070 Laccaria amethystina K443DRAFT_672070 N
LACBIDRAFT_305537 Laccaria bicolor LACBIDRAFT_305537 N
M378DRAFT_787408 Amanita muscaria M378DRAFT_787408 N
M404DRAFT_135916 Pisolithus tinctorius M404DRAFT_135916 N
M408DRAFT_278207 Serendipita vermifera M408DRAFT_278207 N
M413DRAFT_25333 Hebeloma cylindrosporum M413DRAFT_25333 N
PAXRUDRAFT_131223 Paxillus rubicundulus PAXRUDRAFT_131223 N
PHLGIDRAFT_281883 Phlebiopsis gigantea PHLGIDRAFT_281883 N
PILCRDRAFT_7448 Piloderma croceum PILCRDRAFT_7448 N
PLEOSDRAFT_1113210 Pleurotus ostreatus PLEOSDRAFT_1113210 N
SCHCODRAFT_269948 Schizophyllum commune SCHCODRAFT_269948 N
SCLCIDRAFT_137855 Scleroderma citrinum SCLCIDRAFT_137855 N
SERLA73DRAFT_184665 Serpula lacrymans SERLA73DRAFT_184665 N
V565_039080 Rhizoctonia solani V565_039080 N