CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g111000
(
Brassica oleracea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Bo4g111000
T081740_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g111000.1
C2H2 ZF
294
315
FMCRKCGKAFAVRGDWRTHEKN
Bo4g111000.1
C2H2 ZF
314
340
KNCGKLWYCICGSDFKHKRSLKDHIKA
Links
Other
C2H2 ZF
family TFs
Other
Brassica oleracea
TFs
259 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_209306
Agaricus bisporus
AGABI2DRAFT_209306
I
0.000
CC1G_09476
Coprinopsis cinerea
CC1G_09476
I
0.000
CERSUDRAFT_114695
Ceriporiopsis subvermispora
CERSUDRAFT_114695
I
0.000
CY34DRAFT_60788
Suillus luteus
CY34DRAFT_60788
I
0.000
DICSQDRAFT_88737
Dichomitus squalens
DICSQDRAFT_88737
I
0.000
FIBRA_01395
Fibroporia radiculosa
FIBRA_01395
I
0.000
GALMADRAFT_259271
Galerina marginata
GALMADRAFT_259271
I
0.000
GLOTRDRAFT_118212
Gloeophyllum trabeum
GLOTRDRAFT_118212
I
0.000
gwh2.4.337.1
Phanerochaete chrysosporium
gwh2.4.337.1
I
0.000
HETIRDRAFT_238331
Heterobasidion irregulare
HETIRDRAFT_238331
I
0.000
HMPREF1541_02999
Cyphellophora europaea
HMPREF1541_02999
N
0.000
HYDPIDRAFT_89380
Hydnomerulius pinastri
HYDPIDRAFT_89380
I
0.000
JAAARDRAFT_59018
Jaapia argillacea
JAAARDRAFT_59018
I
0.000
K443DRAFT_308353
Laccaria amethystina
K443DRAFT_308353
I
0.000
LACBIDRAFT_254568
Laccaria bicolor
LACBIDRAFT_254568
I
0.000
LACBIDRAFT_254611
Laccaria bicolor
LACBIDRAFT_254611
I
0.000
M378DRAFT_74968
Amanita muscaria
M378DRAFT_74968
I
0.000
M404DRAFT_1005497
Pisolithus tinctorius
M404DRAFT_1005497
I
0.000
M413DRAFT_449306
Hebeloma cylindrosporum
M413DRAFT_449306
I
0.000
Moror_16036
Moniliophthora roreri
Moror_16036
I
0.000
aod-2
Neurospora crassa
NCU03352
D
0.000
PAXINDRAFT_140170
Paxillus involutus
PAXINDRAFT_140170
I
0.000
PAXRUDRAFT_36013
Paxillus rubicundulus
PAXRUDRAFT_36013
I
0.000
PHLGIDRAFT_100651
Phlebiopsis gigantea
PHLGIDRAFT_100651
I
0.000
PILCRDRAFT_528412
Piloderma croceum
PILCRDRAFT_528412
I
0.000
PISMIDRAFT_102262
Pisolithus microcarpus
PISMIDRAFT_102262
I
0.000
PLEOSDRAFT_1032088
Pleurotus ostreatus
PLEOSDRAFT_1032088
I
0.000
POSPLDRAFT_96343
Postia placenta
POSPLDRAFT_96343
I
0.000
SCHCODRAFT_110010
Schizophyllum commune
SCHCODRAFT_110010
D
0.000
SCLCIDRAFT_97185
Scleroderma citrinum
SCLCIDRAFT_97185
I
0.000
SERLA73DRAFT_126671
Serpula lacrymans
SERLA73DRAFT_126671
I
0.000