CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN21670
(
Caenorhabditis brenneri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CBN21670
T083056_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN21670
C2H2 ZF
170
192
YRCDVCDKTFSRSNTLITHKRIH
CBN21670
C2H2 ZF
198
220
FKCEHCGRAFRQPGNLTRHRLTH
CBN21670
C2H2 ZF
226
248
YVCGLCDKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis brenneri
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O7_01927
Cladophialophora yegresii
A1O7_01927
N
G647_10316
Cladophialophora carrionii
G647_10316
N
PV04_00004
Capronia semiimmersa
PV04_00004
N
PV07_06920
Cladophialophora immunda
PV07_06920
N