CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CC1G_08877
(
Coprinopsis cinerea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CC1G_08877
T083139_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_114363
M01461_2.00
Schizophyllum commune
NGATCBDCR
YGHVGATCN
PBM
Najafabadi et al.(2015a)
pTH11153
0.816
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAU82265
C2H2 ZF
234
256
HVCPTCFKRFNRPSSLRIHVNTH
EAU82265
C2H2 ZF
262
286
FRCPWPNCGREFNVNSNMRRHYRNH
Links
Other
C2H2 ZF
family TFs
Other
Coprinopsis cinerea
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_230069
Agaricus bisporus
AGABI2DRAFT_230069
I
0.795
fgenesh1_pg.C_scaffold_2000963
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_2000963
I
0.771
GALMADRAFT_127348
Galerina marginata
GALMADRAFT_127348
I
0.803
GYMLUDRAFT_48183
Gymnopus luxurians
GYMLUDRAFT_48183
I
0.771
HYDPIDRAFT_118106
Hydnomerulius pinastri
HYDPIDRAFT_118106
I
0.771
JAAARDRAFT_198667
Jaapia argillacea
JAAARDRAFT_198667
I
0.771
K443DRAFT_684663
Laccaria amethystina
K443DRAFT_684663
I
0.816
LACBIDRAFT_295582
Laccaria bicolor
LACBIDRAFT_295582
I
0.821
M378DRAFT_532189
Amanita muscaria
M378DRAFT_532189
I
0.803
M404DRAFT_138185
Pisolithus tinctorius
M404DRAFT_138185
I
0.771
M413DRAFT_444305
Hebeloma cylindrosporum
M413DRAFT_444305
I
0.797
Moror_1810
Moniliophthora roreri
Moror_1810
I
0.791
PHACADRAFT_248904
Phanerochaete carnosa
PHACADRAFT_248904
I
0.772
PILCRDRAFT_629612
Piloderma croceum
PILCRDRAFT_629612
I
0.773
PISMIDRAFT_680290
Pisolithus microcarpus
PISMIDRAFT_680290
I
0.771
PLEOSDRAFT_1102653
Pleurotus ostreatus
PLEOSDRAFT_1102653
I
0.766
PUNSTDRAFT_138628
Punctularia strigosozonata
PUNSTDRAFT_138628
I
0.766
PUNSTDRAFT_146509
Punctularia strigosozonata
PUNSTDRAFT_146509
N
0.758
SCHCODRAFT_114363
Schizophyllum commune
SCHCODRAFT_114363
D
0.816
SCLCIDRAFT_41132
Scleroderma citrinum
SCLCIDRAFT_41132
I
0.771