CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA40030
(
Caenorhabditis japonica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CJA40030
T083816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA40030a
C2H2 ZF
109
132
LKCPKCNWHYKYQETLEIHMKEKH
CJA40030a
C2H2 ZF
164
188
YRCDLCRYSTTTKGNLSIHMQSDKH
CJA40030b
C2H2 ZF
109
132
LKCPKCNWHYKYQETLEIHMKEKH
CJA40030b
C2H2 ZF
164
188
YRCDLCRYSTTTKGNLSIHMQSDKH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis japonica
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
BGIOSGA018023
Oryza indica
BGIOSGA018023
N
BRADI2G24790
Brachypodium distachyon
BRADI2G24790
N
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
F775_32837
Aegilops tauschii
F775_32837
N
GRMZM2G104400
Zea mays
GRMZM2G104400
N
GRMZM2G456568
Zea mays
GRMZM2G456568
N
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
LPERR05G13650
Leersia perrieri
LPERR05G13650
N
mgf025137m
Mimulus guttatus
mgf025137m
N
OB05G25040
Oryza brachyantha
OB05G25040
N
OBART05G17230
Oryza barthii
OBART05G17230
N
OGLUM05G18240
Oryza glumaepatula
OGLUM05G18240
N
OMERI05G14890
Oryza meridionalis
OMERI05G14890
N
ONIVA05G17930
Oryza nivara
ONIVA05G17930
N
OPUNC05G15090
Oryza punctata
OPUNC05G15090
N
ORGLA05G0148600
Oryza glaberrima
ORGLA05G0148600
N
ORUFI05G18410
Oryza rufipogon
ORUFI05G18410
N
OS05G0426200
Oryza sativa
OS05G0426200
N
Pavir.J02083
Panicum virgatum
Pavir.J02083
N
Pavir.J07259
Panicum virgatum
Pavir.J07259
N
Pavir.J18990
Panicum virgatum
Pavir.J18990
N
Sb09g020880
Sorghum bicolor
Sb09g020880
N
Si001354m.g
Setaria italica
Si001354m.g
N
Traes_1AL_C4FA8404A
Triticum aestivum
Traes_1AL_C4FA8404A
N
Traes_1DL_F410CF9FD
Triticum aestivum
Traes_1DL_F410CF9FD
N
Traes_5AL_41B98AAEF
Triticum aestivum
Traes_5AL_41B98AAEF
N
TRIUR3_22935
Triticum urartu
TRIUR3_22935
N