COCSADRAFT_79683 (Bipolaris sorokiniana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 COCSADRAFT_79683 T084172_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.812 0.946
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.807 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD68095 C2H2 ZF 120 142
EMD68095 C2H2 ZF 148 172
EMD68095 C2H2 ZF 178 200
EMD68095 C2H2 ZF 206 230

Links

Other C2H2 ZF family TFs
Other Bipolaris sorokiniana TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001096101 Angiostrongylus cantonensis ACAC_0001096101 N 0.000
ACOC_0000018801 Angiostrongylus costaricensis ACOC_0000018801 N 0.000
AFUN010407 Anopheles funestus AFUN010407 N 0.000
ANCCAN_01052 Ancylostoma caninum ANCCAN_01052 N 0.000
EEL_0000283301 Elaeophora elaphi EEL_0000283301 N 0.000
HOXB8 Monodelphis domestica ENSMODG00000009593 N 0.000
Hoxb8 Mus musculus ENSMUSG00000056648 D 0.000
FVEG_06689 Fusarium verticillioides FVEG_06689 N 0.000
genemark-nMf.1.1.scaf08601-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf08601-processed-gene-0.1 N 0.000
HPBE_0000692601 Heligmosomoides bakeri HPBE_0000692601 N 0.000
HPLM_0001305101 Haemonchus placei HPLM_0001305101 N 0.000
Hsal_06667--XP_001121341.1_APIME Harpegnathos saltator Hsal_06667--XP_001121341.1_APIME I 0.000
L893_g7450 Steinernema glaseri L893_g7450 N 0.000
L898_g696 Steinernema monticolum L898_g696 N 0.000
MESCA004913 Megaselia scalaris MESCA004913 N 0.000
MhA1_Contig303.frz3.gene9 Meloidogyne hapla MhA1_Contig303.frz3.gene9 N 0.000
nRc.2.0.1.g25699 Romanomermis culicivorax nRc.2.0.1.g25699 I 0.000
PXEA_0000194701 Protopolystoma xenopodis PXEA_0000194701 N 0.000
PXEA_0001806501 Protopolystoma xenopodis PXEA_0001806501 N 0.000
Sjc_0026350 Schistosoma japonicum Sjc_0026350 N 0.000
SMTD_0002268201 Schistosoma mattheei SMTD_0002268201 N 0.000
TELCIR_03058 Teladorsagia circumcincta TELCIR_03058 N 0.000
TELCIR_25656 Teladorsagia circumcincta TELCIR_25656 N 0.000
WUBG_08134 Wuchereria bancrofti WUBG_08134 N 0.000