CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPC735_053190
(
Coccidioides posadasii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CPC735_053190
T084294_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_00900
M01178_2.00
Histoplasma capsulatum
VWTCCYNNNN
NNNNRGGAWB
PBM
Lambert et al.(2019)
pTH11146
0.810
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EER23949
C2H2 ZF
376
399
QCWDHGCNGREFSTFSNLLRHQRE
EER23949
C2H2 ZF
407
428
SECPYCGAVFTRTTARNGHLSQ
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides posadasii
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr1G14780_001
Musa acuminata
GSMUA_Achr1G14780_001
N
0.000
GSMUA_Achr1G26550_001
Musa acuminata
GSMUA_Achr1G26550_001
N
0.000
GSMUA_Achr7G03800_001
Musa acuminata
GSMUA_Achr7G03800_001
N
0.000