CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM1
(
Anolis carolinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSACAG00000005496
T085928_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000005392
C2H2 ZF
520
542
YECNVCSKTFGQLSNLKVHLRVH
ENSACAP00000005392
C2H2 ZF
548
570
FKCTTCNKGFTQLAHLQKHYLVH
ENSACAP00000005392
C2H2 ZF
576
598
HECQVCHKRFSSTSNLKTHLRLH
ENSACAP00000005392
C2H2 ZF
604
626
YQCKLCTAKFTQFVHLKLHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Anolis carolinensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_08967
Chaetomium globosum
CHGG_08967
N
EMIHUDRAFT_219064
Emiliania huxleyi
EMIHUDRAFT_219064
N
GRMZM2G161418
Zea mays
GRMZM2G161418
I
MTR_3g066070
Medicago truncatula
MTR_3g066070
N
Sjc_0032420
Schistosoma japonicum
Sjc_0032420
N
VDBG_08116
Verticillium albo atrum
VDBG_08116
N
VDBG_08116
Verticillium alfalfae
VDBG_08116
N