ENSAMEG00000004878 (Ailuropoda melanoleuca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMEG00000004878 T086692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000005155 C2H2 ZF 235 259
ENSAMEP00000005155 C2H2 ZF 267 294
ENSAMEP00000005155 C2H2 ZF 300 324
ENSAMEP00000005155 C2H2 ZF 330 355
ENSAMEP00000005155 C2H2 ZF 361 386

Links

Other C2H2 ZF family TFs
Other Ailuropoda melanoleuca TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29647.m002101 Ricinus communis 29647.m002101 I 0.000
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.000
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I 0.000
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I 0.000
GL3 Arabidopsis thaliana AT5G41315 I 0.000
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.000
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.000
BGIOSGA004292 Oryza indica BGIOSGA004292 I 0.000
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.000
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.000
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.000
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.000
Bo4g141990 Brassica oleracea Bo4g141990 I 0.000
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.000
Bra025508 Brassica rapa Bra025508 I 0.000
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I 0.000
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I 0.000
BRADI2G47730 Brachypodium distachyon BRADI2G47730 I 0.000
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.000
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I 0.000
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I 0.000
Ca_07836 Cicer arietinum Ca_07836 I 0.000
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I 0.000
estExt_fgenesh1_pg.C_310143 Physcomitrella patens estExt_fgenesh1_pg.C_310143 I 0.000
estExt_fgenesh1_pg.C_420092 Physcomitrella patens estExt_fgenesh1_pg.C_420092 I 0.000
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I 0.000
Eucgr.H02385 Eucalyptus grandis Eucgr.H02385 I 0.000
Eucgr.H02396 Eucalyptus grandis Eucgr.H02396 I 0.000
Eucgr.H02398 Eucalyptus grandis Eucgr.H02398 I 0.000
evm.TU.supercontig_52.26 Carica papaya evm.TU.supercontig_52.26 I 0.000
evm.TU.supercontig_537.2 Carica papaya evm.TU.supercontig_537.2 N 0.000
F775_10624 Aegilops tauschii F775_10624 N 0.000
F775_11347 Aegilops tauschii F775_11347 I 0.000
F775_11371 Aegilops tauschii F775_11371 I 0.000
F775_14190 Aegilops tauschii F775_14190 I 0.000
F775_18830 Aegilops tauschii F775_18830 N 0.000
F775_19744 Aegilops tauschii F775_19744 N 0.000
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.000
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I 0.000
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.000
GLYMA02G16670 Glycine max GLYMA02G16670 I 0.000
GLYMA03G30940 Glycine max GLYMA03G30940 I 0.000
GLYMA10G03140 Glycine max GLYMA10G03140 I 0.000
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I 0.000
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I 0.000
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I 0.000
GRMZM2G159937 Zea mays GRMZM2G159937 I 0.000
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.000
GRMZM5G822829 Zea mays GRMZM5G822829 N 0.000
GSMUA_Achr3G26180_001 Musa acuminata GSMUA_Achr3G26180_001 I 0.000
GSMUA_Achr3G30620_001 Musa acuminata GSMUA_Achr3G30620_001 I 0.000
GSMUA_Achr4G03160_001 Musa acuminata GSMUA_Achr4G03160_001 I 0.000
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.000
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I 0.000
GSMUA_Achr7G00800_001 Musa acuminata GSMUA_Achr7G00800_001 I 0.000
GSMUA_Achr7G27600_001 Musa acuminata GSMUA_Achr7G27600_001 I 0.000
GSMUA_Achr8G11430_001 Musa acuminata GSMUA_Achr8G11430_001 N 0.000
LPERR01G24170 Leersia perrieri LPERR01G24170 I 0.000
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.000
LPERR04G17390 Leersia perrieri LPERR04G17390 N 0.000
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.000
LPERR07G06180 Leersia perrieri LPERR07G06180 I 0.000
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.000
Lus10011578.g Linum usitatissimum Lus10011578.g I 0.000
Lus10019247.g Linum usitatissimum Lus10019247.g I 0.000
MDP0000225680 Malus domestica MDP0000225680 I 0.000
MDP0000617077 Malus domestica MDP0000617077 I 0.000
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.000
MLOC_64735 Hordeum vulgare MLOC_64735 I 0.000
MLOC_6900 Hordeum vulgare MLOC_6900 I 0.000
MLOC_70409 Hordeum vulgare MLOC_70409 I 0.000
MTR_1g072320 Medicago truncatula MTR_1g072320 I 0.000
OB01G30110 Oryza brachyantha OB01G30110 N 0.000
OB04G28350 Oryza brachyantha OB04G28350 N 0.000
OB04G28380 Oryza brachyantha OB04G28380 N 0.000
OB04G28390 Oryza brachyantha OB04G28390 N 0.000
OBART01G20350 Oryza barthii OBART01G20350 N 0.000
OBART01G28080 Oryza barthii OBART01G28080 I 0.000
OBART04G21320 Oryza barthii OBART04G21320 N 0.000
OBART04G21370 Oryza barthii OBART04G21370 N 0.000
OBART07G07130 Oryza barthii OBART07G07130 I 0.000
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.000
OGLUM01G32030 Oryza glumaepatula OGLUM01G32030 I 0.000
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.000
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.000
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.000
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.000
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.000
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.000
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.000
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.000
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.000
OMERI07G05880 Oryza meridionalis OMERI07G05880 I 0.000
ONIVA01G22920 Oryza nivara ONIVA01G22920 N 0.000
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.000
ONIVA01G32020 Oryza nivara ONIVA01G32020 I 0.000
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.000
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.000
ONIVA07G05400 Oryza nivara ONIVA07G05400 I 0.000
OPUNC01G27950 Oryza punctata OPUNC01G27950 I 0.000
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.000
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.000
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I 0.000
ORGLA01G0232100 Oryza glaberrima ORGLA01G0232100 I 0.000
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.000
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.000
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.000
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.000
ORUFI01G31210 Oryza rufipogon ORUFI01G31210 I 0.000
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.000
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.000
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.000
OS01G0705700 Oryza sativa OS01G0705700 I 0.000
OS04G0557200 Oryza sativa OS04G0557200 N 0.000
OS04G0557800 Oryza sativa OS04G0557800 N 0.000
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.000
Pavir.Gb01093 Panicum virgatum Pavir.Gb01093 N 0.000
Pavir.J12952 Panicum virgatum Pavir.J12952 I 0.000
Pavir.J34298 Panicum virgatum Pavir.J34298 N 0.000
Pavir.J39604 Panicum virgatum Pavir.J39604 I 0.000
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.000
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I 0.000
PGSC0003DMG402030621 Solanum tuberosum PGSC0003DMG402030621 I 0.000
PK09702.1 Cannabis sativa PK09702.1 D 0.000
Pm002304 Prunus mume Pm002304 I 0.000
Pm020164 Prunus mume Pm020164 I 0.000
Pm023805 Prunus mume Pm023805 I 0.000
POPTR_0002s05510 Populus trichocarpa POPTR_0002s05510 I 0.000
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I 0.000
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.000
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I 0.000
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I 0.000
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I 0.000
SapurV1A.0289s0260 Salix purpurea SapurV1A.0289s0260 I 0.000
Sb02g006390 Sorghum bicolor Sb02g006390 I 0.000
Sb03g032420 Sorghum bicolor Sb03g032420 I 0.000
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.000
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.000
Si000845m.g Setaria italica Si000845m.g I 0.000
Si004795m.g Setaria italica Si004795m.g I 0.000
Si012401m.g Setaria italica Si012401m.g I 0.000
Si029106m.g Setaria italica Si029106m.g I 0.000
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I 0.000
TCM_004403 Theobroma cacao TCM_004403 I 0.000
TCM_037645 Theobroma cacao TCM_037645 I 0.000
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.000
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I 0.000
TRAES3BF036800040CFD_g Triticum aestivum TRAES3BF036800040CFD_g I 0.000
TRAES3BF058400020CFD_g Triticum aestivum TRAES3BF058400020CFD_g I 0.000
Traes_1AS_4DA31F550 Triticum aestivum Traes_1AS_4DA31F550 I 0.000
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.000
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I 0.000
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I 0.000
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I 0.000
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.000
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.000
TRIUR3_26880 Triticum urartu TRIUR3_26880 I 0.000
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.000
TT8 Vitis vinifera VIT_07s0104g00090 I 0.000