ENSAMXG00000003833 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000003833 T087094_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF143
M02899_2.00 		Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR		 SELEX
Jolma et al.(2013)
ZNF143_1 		0.812 0.925
ZNF143
M07931_2.00 		Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford 		0.812 0.925
ZNF143
M08910_2.00 		Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A 		0.812 0.925
ZNF143
M09510_2.00 		Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN		 Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600 		0.812 0.925
ZNF143
M10247_2.00 		Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN		 Transfac
Matys et al.(2006)
V$STAF_01 		0.812 0.925
ZNF143
M10248_2.00 		Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK		 Transfac
Matys et al.(2006)
V$STAF_02 		0.812 0.925
ZNF143
M10249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAF_Q4_01 		0.812 0.925
Zfp143
M09010_2.00 		Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A 		0.811 0.919
ZNF76
M04398_2.00 		Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX 		0.764 0.826
ZNF76
M08278_2.00 		Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV		 ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE 		0.764 0.826
ZNF76
M08856_2.00 		Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT		 Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C 		0.764 0.826
ZNF76
M04399_2.00 		Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX 		0.764 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000003925 C2H2 ZF 232 256
ENSAMXP00000003925 C2H2 ZF 262 286
ENSAMXP00000003925 C2H2 ZF 292 316
ENSAMXP00000003925 C2H2 ZF 322 346
ENSAMXP00000003925 C2H2 ZF 352 376
ENSAMXP00000003925 C2H2 ZF 382 406
ENSAMXP00000003925 C2H2 ZF 412 435
ENSAMXP00000003927 C2H2 ZF 232 256
ENSAMXP00000003927 C2H2 ZF 262 286
ENSAMXP00000003927 C2H2 ZF 292 316
ENSAMXP00000003927 C2H2 ZF 322 346
ENSAMXP00000003927 C2H2 ZF 352 376
ENSAMXP00000003927 C2H2 ZF 382 406
ENSAMXP00000003927 C2H2 ZF 412 435

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016711 Ailuropoda melanoleuca ENSAMEG00000016711 I
ZNF79 Bos taurus ENSBTAG00000023885 I
ENSBTAP00000032740-D1 Bos grunniens ENSBTAP00000032740-D1 I
ZNF79 Canis familiaris ENSCAFG00000031097 I
ZNF79 Choloepus hoffmanni ENSCHOG00000006736 I
ZNF79 Callithrix jacchus ENSCJAG00000018073 I
ENSCSAG00000013717 Chlorocebus sabaeus ENSCSAG00000013717 I
ZNF79 Dasypus novemcinctus ENSDNOG00000047558 I
ZNF79 Equus caballus ENSECAG00000009109 I
ZNF79 Homo sapiens ENSG00000196152 D
ZNF79 Gorilla gorilla ENSGGOG00000000647 I
ZNF79 Microcebus murinus ENSMICG00000002323 I
ZNF79 Macaca mulatta ENSMMUG00000021760 I
ZNF79 Monodelphis domestica ENSMODG00000011141 I
ENSMPUG00000013847 Mustela putorius furo ENSMPUG00000013847 I
ENSNLEG00000017444 Nomascus leucogenys ENSNLEG00000017444 I
ENSOARG00000012092 Ovis aries ENSOARG00000012092 I
ZNF79 Otolemur garnettii ENSOGAG00000000595 I
ENSP00000362446 Macaca fascicularis ENSP00000362446 I
ENSPANG00000024822 Papio anubis ENSPANG00000024822 I
ZNF79 Procavia capensis ENSPCAG00000007422 I
ENSPPYG00000019621 Pongo abelii ENSPPYG00000019621 I
ZNF79 Pteropus vampyrus ENSPVAG00000000923 I
ZNF79 Sus scrofa ENSSSCG00000005611 I
ZNF79 Tupaia belangeri ENSTBEG00000005767 I
ZNF79 Tursiops truncatus ENSTTRG00000015699 I
ZNF79 Vicugna pacos ENSVPAG00000005120 I