CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM14
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000000060
T087689_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Prdm14
M09001_2.00
Mus musculus
NHRGKKCTCTAMCHHN
NDDGKTAGAGMMCYDN
Misc
Kulakovskiy et al.(2013)
PRD14_MOUSE.H11MO.0.A
0.761
0.883
PRDM14
M08897_2.00
Homo sapiens
NRGGWCYCTAACYH
DRGTTAGRGWCCYN
Misc
Kulakovskiy et al.(2013)
PRD14_HUMAN.H11MO.0.A
0.761
0.927
PRDM14
M09509_2.00
Homo sapiens
RSTTAGRGACCY
RGGTCYCTAASY
Misc
Heinz et al.(2010)
H1-PRDM14_GSE22767
0.761
0.927
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000000066
C2H2 ZF
400
421
YRCERCGKVFTYKYYRDKHLKY
ENSBTAP00000000066
C2H2 ZF
432
455
FPCSLCKRSFEKRDRLRIHILHVH
ENSBTAP00000000066
C2H2 ZF
461
483
HKCSTCGKCFSQSSSLNKHMRVH
ENSBTAP00000000066
C2H2 ZF
489
511
YHCVYCTKKFTASSILRTHIRQH
ENSBTAP00000000066
C2H2 ZF
517
540
FKCKYCGKSFASHAAHDSHVRRSH
ENSBTAP00000000066
C2H2 ZF
546
568
SPCNTCGKTFSDQEAFHSHMKSH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLUG_02455
Candida lusitaniae
CLUG_02455
N
0.000
CLUG_02455
Clavispora lusitaniae
CLUG_02455
N
0.000
CORT_0D04660
Candida orthopsilosis
CORT_0D04660
N
0.000
CPAG_04097
Candida parapsilosis
CPAG_04097
N
0.000
DEHA2G23188g
Debaryomyces hansenii
DEHA2G23188g
N
0.000
estExt_fgeneshPB_pg.C_10006
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_10006
N
0.000
e_gw1.3.1744.1
Mucor circinelloides
e_gw1.3.1744.1
N
0.000
GNLVRS01_PISO0I16046g
Millerozyma farinosa
GNLVRS01_PISO0I16046g
N
0.000
GNLVRS01_PISO0J17851g
Millerozyma farinosa
GNLVRS01_PISO0J17851g
N
0.000
PAS_chr2-1_0225
Komagataella pastoris
PAS_chr2-1_0225
N
0.000
PGUG_04098
Candida guilliermondii
PGUG_04098
N
0.000
PGUG_04098
Meyerozyma guilliermondii
PGUG_04098
N
0.000
PICST_87861
Scheffersomyces stipitis
PICST_87861
N
0.000
SPPG_00605
Spizellomyces punctatus
SPPG_00605
N
0.000
XP_002491115.1
Pichia pastoris
XP_002491115.1
N
0.000