SNAI2 (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000013227 T087876_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.815 0.965
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.815 0.965
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.815 0.965
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.815 0.965
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.815 0.965
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.815 0.965
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.815 0.965
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.815 0.965
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.815 0.965
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.815 0.965
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.815 0.965
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.815 0.965
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.811 0.956
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.769 0.825
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000017600 C2H2 ZF 128 150
ENSBTAP00000017600 C2H2 ZF 159 181
ENSBTAP00000017600 C2H2 ZF 185 207
ENSBTAP00000017600 C2H2 ZF 213 235
ENSBTAP00000017600 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB09078.1 Alternaria brassicicola AB09078.1 I 0.000
AUEXF2481DRAFT_108778 Aureobasidium subglaciale AUEXF2481DRAFT_108778 I 0.000
BDDG_09015 Blastomyces dermatitidis BDDG_09015 I 0.000
ACLA_095380 Aspergillus clavatus CADACLAG00009016 N 0.000
AFUA_6G05160 Aspergillus fumigatus CADAFUAG00000585 I 0.000
CADANGAG00011690 Aspergillus niger CADANGAG00011690 I 0.000
ANIA_06503 Aspergillus nidulans CADANIAG00007272 I 0.000
CADAORAG00010396 Aspergillus oryzae CADAORAG00010396 N 0.000
ATEG_05658 Aspergillus terreus CADATEAG00000806 I 0.000
NFIA_051730 Neosartorya fischeri CADNFIAG00004445 I 0.000
CIMG_02603 Coccidioides immitis CIMG_02603 I 0.000
COCC4DRAFT_163074 Bipolaris maydis COCC4DRAFT_163074 I 0.000
COCCADRAFT_104228 Bipolaris zeicola COCCADRAFT_104228 I 0.000
COCMIDRAFT_85681 Bipolaris oryzae COCMIDRAFT_85681 I 0.000
COCSADRAFT_136667 Bipolaris sorokiniana COCSADRAFT_136667 I 0.000
COCVIDRAFT_108803 Bipolaris victoriae COCVIDRAFT_108803 I 0.000
CPC735_037450 Coccidioides posadasii CPC735_037450 I 0.000
estExt_fgenesh1_pg.C_70029 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_70029 I 0.000
EURHEDRAFT_451414 Aspergillus ruber EURHEDRAFT_451414 I 0.000
EV44_g5109 Erysiphe necator EV44_g5109 I 0.000
e_gw1.00172.1.1 Aspergillus carbonarius e_gw1.00172.1.1 I 0.000
GSTUM_00005141001 Tuber melanosporum GSTUM_00005141001 I 0.000
H102_02673 Trichophyton rubrum H102_02673 I 0.000
H105_02690 Trichophyton soudanense H105_02690 I 0.000
HCBG_09143 Histoplasma capsulatum HCBG_09143 D 0.000
LEMA_P018870.1 Leptosphaeria maculans LEMA_P018870.1 I 0.000
M437DRAFT_9881 Aureobasidium melanogenum M437DRAFT_9881 I 0.000
M438DRAFT_281957 Aureobasidium pullulans M438DRAFT_281957 I 0.000
MCYG_05256 Arthroderma otae MCYG_05256 I 0.000
MGYG_06299 Microsporum gypseum MGYG_06299 I 0.000
MPH_06655 Macrophomina phaseolina MPH_06655 I 0.000
PAAG_03645 Paracoccidioides sp lutzii PAAG_03645 I 0.000
PABG_06970 Paracoccidioides brasiliensis PABG_06970 I 0.000
Pc12g04570 Penicillium chrysogenum Pc12g04570 N 0.000
PCH_Pc12g04570 Penicillium rubens PCH_Pc12g04570 N 0.000
PDE_01025 Penicillium oxalicum PDE_01025 I 0.000
PEX1_093120 Penicillium expansum PEX1_093120 N 0.000
PITC_072040 Penicillium italicum PITC_072040 N 0.000
PTRG_01131 Pyrenophora triticirepentis PTRG_01131 I 0.000
PTT_19009 Pyrenophora teres PTT_19009 I 0.000
PV09_00215 Verruconis gallopava PV09_00215 I 0.000
PVAR5_8036 Byssochlamys spectabilis PVAR5_8036 I 0.000
SETTUDRAFT_105303 Setosphaeria turcica SETTUDRAFT_105303 I 0.000
SNOG_09345 Stagonospora nodorum SNOG_09345 I 0.000
TEQG_04727 Trichophyton equinum TEQG_04727 I 0.000
TESG_03936 Trichophyton tonsurans TESG_03936 I 0.000
U727_0043408091 Penicillium solitum U727_0043408091 N 0.000
W97_05116 Coniosporium apollinis W97_05116 I 0.000