CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM2
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000020552
T087981_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000027387
C2H2 ZF
348
370
FPCQHCERKFTTKQGLERHMHIH
ENSBTAP00000027387
C2H2 ZF
378
400
FKCKYCGKAFGTQINRRRHERRH
ENSBTAP00000027387
C2H2 ZF
1115
1137
FVCNVCELPFLSIKDLTKHLSIH
ENSBTAP00000027387
C2H2 ZF
1172
1195
FVCSVCKKEFAFLCNLQQHQRDLH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R001472
Calypte anna
Aan_R001472
N
0.824
Afo_R013021
Aptenodytes forsteri
Afo_R013021
N
0.824
Alligator_sinensis_CCG015430.1
Alligator sinensis
Alligator_sinensis_CCG015430.1
N
0.819
Cmyd_10020922
Chelonia mydas
Cmyd_10020922
N
0.819
PRDM2
Anolis carolinensis
ENSACAG00000010749
N
0.777
ENSAMEG00000006714
Ailuropoda melanoleuca
ENSAMEG00000006714
N
0.822
ENSAPLG00000014764
Anas platyrhynchos
ENSAPLG00000014764
N
0.819
ENSCAFG00000016361
Canis familiaris
ENSCAFG00000016361
N
0.822
PRDM2
Equus caballus
ENSECAG00000008911
N
0.827
PRDM2
Erinaceus europaeus
ENSEEUG00000014607
N
0.822
ENSFALG00000009941
Ficedula albicollis
ENSFALG00000009941
N
0.824
ENSGALG00000004089
Gallus gallus
ENSGALG00000004089
N
0.807
PRDM2
Meleagris gallopavo
ENSMGAG00000005888
N
0.807
PRDM2
Myotis lucifugus
ENSMLUG00000006969
N
0.822
ENSMPUG00000016352
Mustela putorius furo
ENSMPUG00000016352
N
0.822
PRDM2
Ornithorhynchus anatinus
ENSOANG00000009908
N
0.824
ENSP00000235372-D1
Bos grunniens
ENSP00000235372-D1
N
0.827
ENSPSIG00000005394
Pelodiscus sinensis
ENSPSIG00000005394
N
0.814
PRDM2
Tursiops truncatus
ENSTTRG00000005029
N
0.827
Gfo_R002647
Geospiza fortis
Gfo_R002647
N
0.824
Myotis_brandtii_PRDM2_10022047
Myotis brandtii
Myotis_brandtii_PRDM2_10022047
N
0.822
Ogr07692
Ophisaurus gracilis
Ogr07692
N
0.819
prdm2
Xenopus tropicalis
XB-GENE-5957530
N
0.797