CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF48
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000001104
T089778_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000000999
C2H2 ZF
116
137
VCGECGKSFRQMSDLVKHQRTH
ENSCPOP00000000999
C2H2 ZF
143
165
YKCGVCGKGFGDSSARIKHQRTH
ENSCPOP00000000999
C2H2 ZF
195
217
TICGECGKSFRQSSDLVKHQRTH
ENSCPOP00000000999
C2H2 ZF
223
245
YKCGICGKGFSDSSARIKHQRTH
ENSCPOP00000000999
C2H2 ZF
278
300
YICTDCGKRFVLSCSLLSHQRSH
ENSCPOP00000000999
C2H2 ZF
306
328
FGCDVCGKEFARGSDLVKHLRVH
ENSCPOP00000000999
C2H2 ZF
334
356
YLCPECGKGFADSSARVKHLRTH
ENSCPOP00000000999
C2H2 ZF
362
384
HACPECDRTFSLSSTLLRHRLTH
ENSCPOP00000000999
C2H2 ZF
456
478
HKCPECGKAFRRSSDLVKHHRVH
ENSCPOP00000000999
C2H2 ZF
484
506
YLCPECGKGFADSSARVKHLRTH
ENSCPOP00000000999
C2H2 ZF
548
570
HVCGFCGKEFPRSSDLVKHRRTH
ENSCPOP00000000999
C2H2 ZF
576
598
YKCAECGKGFGDSSARIKHQRGH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF48
Bos taurus
ENSBTAG00000031806
N
0.827
ENSBTAP00000028273-D1
Bos grunniens
ENSBTAP00000028273-D1
N
0.827
ZNF48
Canis familiaris
ENSCAFG00000029852
N
0.825
ZNF48
Callithrix jacchus
ENSCJAG00000002611
I
0.823
ENSCSAG00000006039
Chlorocebus sabaeus
ENSCSAG00000006039
N
0.827
Zfp553
Dipodomys ordii
ENSDORG00000013148
N
0.819
ZNF48
Felis catus
ENSFCAG00000028864
N
0.827
ZNF48
Homo sapiens
ENSG00000180035
N
0.827
ZNF48
Loxodonta africana
ENSLAFG00000008821
N
0.826
ZNF48
Macaca mulatta
ENSMMUG00000029159
N
0.827
ENSMPUG00000012333
Mustela putorius furo
ENSMPUG00000012333
N
0.827
Zfp553
Mus musculus
ENSMUSG00000045598
N
0.827
ENSNLEG00000015834
Nomascus leucogenys
ENSNLEG00000015834
N
0.827
ZNF48
Oryctolagus cuniculus
ENSOCUG00000013651
N
0.823
ENSP00000417204
Macaca fascicularis
ENSP00000417204
N
0.827
ENSPANG00000016527
Papio anubis
ENSPANG00000016527
N
0.827
ZNF48
Procavia capensis
ENSPCAG00000009103
N
0.824
ENSPPYG00000007271
Pongo abelii
ENSPPYG00000007271
N
0.827
ZNF48
Pan troglodytes
ENSPTRG00000007999
N
0.827
Znf48
Rattus norvegicus
ENSRNOG00000017837
N
0.827
ZNF48
Sus scrofa
ENSSSCG00000007801
N
0.827
ENSSTOG00000021915
Ictidomys tridecemlineatus
ENSSTOG00000021915
N
0.826
ZNF48
Tursiops truncatus
ENSTTRG00000017273
N
0.823
Myotis_brandtii_ZNF48_10014474
Myotis brandtii
Myotis_brandtii_ZNF48_10014474
N
0.827