CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM16
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000011498
T089937_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000010339
C2H2 ZF
206
223
PQVFTDPSNLQRHIRSQH
ENSCPOP00000010339
C2H2 ZF
229
251
HACPDCGKTFATSSGLKQHKHIH
ENSCPOP00000010339
C2H2 ZF
257
279
FICEVCHKSYTQFSNLCRHKRMH
ENSCPOP00000010339
C2H2 ZF
286
307
IKCRDCGQMFSTTSSLNKHRRF
ENSCPOP00000010339
C2H2 ZF
785
807
YTCRYCGKIFPRSANLTRHLRTH
ENSCPOP00000010339
C2H2 ZF
813
836
YRCKYCDRSFSISSNLQRHVRNIH
ENSCPOP00000010339
C2H2 ZF
842
864
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA011152
Anopheles arabiensis
AARA011152
N
AGAP008416
Anopheles gambiae
AGAP008416
N
AMEC002615
Anopheles melas
AMEC002615
N
AMEM014731
Anopheles merus
AMEM014731
N
AQUA008710
Anopheles quadriannulatus
AQUA008710
N