CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000005029
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000005029
T090313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF682
M05858_2.00
Homo sapiens
DDHYMAGCCCN
NGGGCTKRDHH
SMiLE-seq
Isakova et al.(2017)
ZNF682
0.807
0.981
ZNF682
M07718_2.00
Homo sapiens
VVSVNNNNVNGRVNMAGCCCH
DGGGCTKNBYCNBNNNNBSBB
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF682.RCADE.ReprocessedData
0.807
0.981
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000001352
C2H2 ZF
173
195
FKCVQCGKVFKSHSGLSYHKIIH
ENSCSAP00000001352
C2H2 ZF
201
223
YICEECGKTFKWFSYLTKHKRIH
ENSCSAP00000001352
C2H2 ZF
229
251
YKCEECGKAFNWCSTLTKHKRIH
ENSCSAP00000001352
C2H2 ZF
257
279
YKCEECGKAFHWCSPFVRHKKIH
ENSCSAP00000001352
C2H2 ZF
285
307
YTCEECGRAFNRHSHLTKHKTIH
ENSCSAP00000001352
C2H2 ZF
313
335
YKCKECGKAFNHCSLLTIHERTH
ENSCSAP00000001352
C2H2 ZF
341
363
YKCEECGKAFNSSSILTEHKVIH
ENSCSAP00000001352
C2H2 ZF
369
391
YKCEKCDKVFKRFSYLTKHKRIH
ENSCSAP00000001352
C2H2 ZF
397
419
YKCEECGKAFNWSSILTEHKRIH
ENSCSAP00000001352
C2H2 ZF
425
447
YNCEECGKAFNRCSHLTRHKKIH
ENSCSAP00000001352
C2H2 ZF
453
474
YKCEECGKAFKRCSHLNEHKRV
ENSCSAP00000001352
C2H2 ZF
480
498
SCKYKKCGEAFTHCSNLTT
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgeneshPB_pg.12__85
Phycomyces blakesleeanus
fgeneshPB_pg.12__85
N
fgeneshPB_pg.18__69
Phycomyces blakesleeanus
fgeneshPB_pg.18__69
N
fgeneshPB_pg.1__1109
Phycomyces blakesleeanus
fgeneshPB_pg.1__1109
N
fgeneshPB_pg.24__139
Phycomyces blakesleeanus
fgeneshPB_pg.24__139
N
fgeneshPB_pg.32__104
Phycomyces blakesleeanus
fgeneshPB_pg.32__104
N
fgeneshPB_pg.52__12
Phycomyces blakesleeanus
fgeneshPB_pg.52__12
N
fgeneshPB_pg.8__237
Phycomyces blakesleeanus
fgeneshPB_pg.8__237
N
fgeneshPB_pg.92__8
Phycomyces blakesleeanus
fgeneshPB_pg.92__8
N