CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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rreb1a
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000063701
T090993_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000087763
C2H2 ZF
139
161
IACPLCDKGFQNQHQLTMHIRQH
ENSDARP00000087763
C2H2 ZF
170
192
HSCSICGKSLSSASSLDRHMLVH
ENSDARP00000087763
C2H2 ZF
198
220
YKCTVCHQTFTTNGNMHRHMKIH
ENSDARP00000087763
C2H2 ZF
694
716
YPCRFCDQVFAFSGVLQAHMRYH
ENSDARP00000087763
C2H2 ZF
722
744
HQCNICDYVAPDKATLIRHLRTH
ENSDARP00000087763
C2H2 ZF
750
773
YVCRLCLYPFTVKANCERHLRKKH
ENSDARP00000087763
C2H2 ZF
806
828
TTCRFCGEDLKTFRALQIHLRTH
ENSDARP00000087763
C2H2 ZF
1202
1224
MICPFCPRVFPWASSLQRHMLTH
ENSDARP00000087763
C2H2 ZF
1230
1253
YPCPQCDAFFSTKSNCERHLLRKH
ENSDARP00000087763
C2H2 ZF
1510
1532
KVCSICNKRFWSLQDLTRHMRSH
ENSDARP00000087763
C2H2 ZF
1538
1560
YKCQTCERTFTLKHSLVRHQRIH
ENSDARP00000118235
C2H2 ZF
43
65
IACPLCDKGFQNQHQLTMHIRQH
ENSDARP00000118235
C2H2 ZF
74
96
HSCSICGKSLSSASSLDRHMLVH
ENSDARP00000118235
C2H2 ZF
102
124
YKCTVCHQTFTTNGNMHRHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin111154
Clonorchis sinensis
csin111154
N
Sjc_0078280
Schistosoma japonicum
Sjc_0078280
N
Smp_078550
Schistosoma mansoni
Smp_078550
N
SMTD_0002136501
Schistosoma mattheei
SMTD_0002136501
N
T265_13597
Opisthorchis viverrini
T265_13597
N